Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 1e-14 seq3 95.1 1e-14 seq9 82.4 6e-11 >seq7 Length=40266641 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/94 (84%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 114388 || |||||||| ||||||||||| |||| |||||||||||| ||| |||||||||| Sbjct 12782588 TGCCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGGATTGTAGGATCTAAGGA 12782647 Query 114389 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 |||| ||||||| || ||||||||||| ||| || Sbjct 12782648 ACCATAACTGATTTAATGAGCCATTCGCGGTTTC 12782681 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/94 (84%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 115585 || |||||||| ||||||||||| |||| |||||||||||| ||| |||||||||| Sbjct 12782588 TGCCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGGATTGTAGGATCTAAGGA 12782647 Query 115586 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 |||| ||||||| || ||||||||||| ||| || Sbjct 12782648 ACCATAACTGATTTAATGAGCCATTCGCGGTTTC 12782681 >seq3 Length=91555047 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/94 (84%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 115585 || |||||||| ||||||||||| |||| |||||||||||| ||| |||||||||| Sbjct 68332640 TGCCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGGATTGTAGGATCTAAGGA 68332581 Query 115586 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 |||| ||||||| || ||||||||||| ||| || Sbjct 68332580 ACCATAACTGATTTAATGAGCCATTCGCGGTTTC 68332547 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/94 (84%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 114388 || |||||||| ||||||||||| |||| |||||||||||| ||| |||||||||| Sbjct 68332640 TGCCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGGATTGTAGGATCTAAGGA 68332581 Query 114389 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 |||| ||||||| || ||||||||||| ||| || Sbjct 68332580 ACCATAACTGATTTAATGAGCCATTCGCGGTTTC 68332547 >seq9 Length=97764462 Score = 82.4 bits (90), Expect = 6e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||| || || |||||||||||||| || |||||| || ||||| ||||| | Sbjct 51001752 CCTCCTCTGAGTCGGAGCACCAGATGAAGTGTAGACTCCTTTTGGATGTTATAATCCAGC 51001693 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || | || || || ||||| || || |||||||| | | |||||| || || || Sbjct 51001692 AAGGACCTATCATCCTCTAATTGTTTACCTGCAAATATTAATCTCTGCTGGTCTACAGGG 51001633 Query 34021 ACGCTCTCTTTGTCCATAATTTTTT 34045 | | || || ||||| ||||||| Sbjct 51001632 ATTCCTTCCTTCTCCATGATTTTTT 51001608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397038015281278