Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 5e-13 >seq9 Length=97764462 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 138383 CGCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGT 138442 |||| || |||| |||||| | || || || | | |||||||| || |||||||||| Sbjct 51002212 CGCACCC-CCTCTCAAACGGAGTACCAAGTGAAGCGTGGACTCCTTCTGTATGTTGTAGT 51002154 Query 138443 CGCTCATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTC 138500 |||||| ||| ||| ||||||||||| || |||| | |||| | ||| |||||||| Sbjct 51002153 CGCTCA--GTATGCGGTGATCCTCGAGTTGCTTCCCGGCAAAGATCAAACGTTGTTGGTC 51002096 Query 138501 CGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 | ||||| || ||||| || ||| || | |||||| Sbjct 51002095 AAGGGGTATTCCCTCTTTTTCAAGGATCTTCT-TTTTAA 51002058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496231141672080