Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 1e-13 >seq9 Length=97764462 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 || || || || || || |||||||||||||| ||| | | || || || |||| | Sbjct 51001962 ACCAAGTGGAGAGTTGACTCTTTTTGTATGTTATAAGCTTTCAG--TTGCCGATCGTCCT 51001905 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | ||||| || || | ||||| || || || || ||| ||||| |||||||| Sbjct 51001904 CGAGCTGTTTCCCGGCAAAAATCAAGCGTTGCTGATCAGGTGGTATTCCCTCCTTGTCTT 51001845 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 ||| || |||| || | ||||| |||| | ||||| |||| || ||||||| Sbjct 51001844 GAATCTTCTTTTTCACGTTCTCTATGCTATCATCTTCATCTACATCTAGAGTGATGGTTT 51001785 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| || || ||||| ||||| || ||||| Sbjct 51001784 TACCAGTGAGTGTTTTCACAAAGATCTGCAT 51001754 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| ||| | | || || ||||| || || || || ||||||||||| ||||| Sbjct 51002208 CCCCCTCTCAAACGGAGTACCAAGTGAAGCGTGGACTCCTTCTGTATGTTGTAGTCGCTC 51002149 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || || | || || | ||| || || || | |||||||| |||||||| || Sbjct 51002148 AGTATGCGGTGATCCTCGAGTTGCTTCCCGGCAAAGATCAAACGTTGTTGGTCAAGGGGT 51002089 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGT---ATCGCTATTTTCT 15126 ||||| || || ||| || || |||| ||| |||| ||| | ||||| ||| Sbjct 51002088 ATTCCCTCTTTTTCAAGGATCTTCTTTTTAACATTTTCGATACTGTCATCGC---CCTCT 51002032 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||| ||||| || || ||||| || || || || || |||||||| Sbjct 51002031 ACATTTAAAGTAATTGTCTTTCCTGTAAGTGTCTTCACGAAGATTTGCAT 51001982 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| ||| | | ||| ||||| || || || ||||| || |||||||||||| Sbjct 51006817 CCTCCTCTCAAACGAAGAACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAATCGGAC 51006758 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| | ||||| || || | ||||||||||| || || || Sbjct 51006757 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGGGGG 51006698 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| || ||||| ||||| || ||| |||| ||||| || || || Sbjct 51006697 ATTCCCTCTTTGTCCTGGATTTTAGCCTTAACATTTTCGATAGTGTCTGAGGGCTCAACT 51006638 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || || ||||| || || |||||||| || || || ||||| Sbjct 51006637 TCAAGTGTGATTGTTTTGCCAGTGAGAGTTTTCACGAAGATCTGCAT 51006591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357370051552115