Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 2e-14 seq1597 86.0 1e-11 >seq1 Length=104615532 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || |||| |||||| || | || ||| || |||||||||| |||||||| ||| Sbjct 19031883 TCATCCCTGCTGATAAGTTCATTACTGAATGTAAGTCCAGGCATGATCCCCCTCTTCTTG 19031824 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 |||||||| || || || ||| ||| ||||||||| || || || || || || | Sbjct 19031823 AGCCAGAATATGGCGGCAAAACTTCCACTGAAGAAGATTCCTTCTACGGCAGCAAAGCCA 19031764 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCC 48334 | | ||||||| ||| || | || ||| |||||| || |||||||| ||| Sbjct 19031763 ACAACTCGCTCTCCGTAAGTAGATTCCTCGTCACCGATCCATTTAATAGCCCAGTCGGCC 19031704 Query 48335 TTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 ||||| || | || ||||| || || ||||| Sbjct 19031703 TTCTTTTTCACACAGGGCATTGTTTCAATGGC 19031672 >seq1597 Length=274804 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || |||| |||||| || | || ||| || |||||||||| ||||||| || Sbjct 211178 TCATCCCTGCTGATAAGTTCATTACTGAATGTAAGTCCAGGCATGATACCCCTCTTCTTC 211237 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 |||||||| || || || ||| ||| ||||||||| || || || || || || | Sbjct 211238 AGCCAGAATATGGCGGCAAAACTTCCACTGAAGAAGATTCCTTCTACGGCAGCAAAGCCA 211297 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCC 48334 | | ||||||| ||| || | || ||| ||||| || |||||||| ||| Sbjct 211298 ACAACTCGCTCTCCGTAAGTAGATTCCTCGTCACCAATCCATTTAATAGCCCAGTCGGCC 211357 Query 48335 TTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||||||| | || ||||| || || ||||| Sbjct 211358 TTCTTCTTCACACAGGGCATTGTTTCAATGGC 211389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931474125077760