Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq9 102 1e-16 >seq9 Length=97764462 Score = 102 bits (112), Expect = 1e-16 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | |||||| | ||||| ||||| || || |||| || || || | Sbjct 51001754 ATGCAGATCTTTGTGAAAACACTCACTGGTAAAACCATCACTCTAGATGTAGATGAAGAT 51001813 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||||||||||| || || ||||| || || || ||||| || || || Sbjct 51001814 GATAGCATAGAGAACGTGAAAAAGAAGATTCAAGACAAGGAGGGAATACCACCTGATCAG 51001873 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGA-TACCAG-AACTTTATCAGATTATA 156000 ||| | ||||||| |||||| || |||||||| || | | | |||| | || ||||| Sbjct 51001874 CAACGCTTGATTTTTGCCGGGAAACAGCTCGAGGACGATCGGCAACTGAA--AGCTTATA 51001931 Query 156001 ATATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 | ||| |||||| | || || || || ||| Sbjct 51001932 ACATACAAAAAGAGTCAACTCTCCACTTGGTG 51001963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731825901212400