Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq9 107 5e-18 >seq9 Length=97764462 Score = 107 bits (118), Expect = 5e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| |||||| ||||| || ||||| ||||| | ||||| || || ||| Sbjct 51006822 CAGATATTTGTCAAAACTCTCACTGGCAAAACAATCACACTTGAAGTTGAGCCCTCAGAC 51006881 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| || || || || ||||| ||||| || || || Sbjct 51006882 ACTATCGAAAATGTTAAGGCTAAAATCCAGGACAAAGAGGGAATCCCCCCAGATCAGCAG 51006941 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| |||||||| ||| | |||||||| | ||| || ||||||||||| || Sbjct 51006942 CGTTTGATCTTTGCCGGAAAACAGCTTGAAGATGGCCGCACTCTGTCCGATTACAACATC 51007001 Query 206353 CAGAAAGAGTCTAC 206366 ||||||||||| || Sbjct 51007002 CAGAAAGAGTCCAC 51007015 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| ||||| | ||||| || || ||||| ||||| Sbjct 51006606 AAAACTCTCACTGGCAAAACAATCACACTTGAAGTTGAGCCCTCAGACACTATCGAAAAT 51006665 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || || || || ||||| ||||| || || || | | ||||| Sbjct 51006666 GTTAAGGCTAAAATCCAGGACAAAGAGGGAATCCCCCCAGATCAGCAGCGTTTGATCTTT 51006725 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||| ||| | |||||||| | ||| || ||||||||||| ||||||||||||| Sbjct 51006726 GCCGGAAAACAGCTTGAAGATGGCCGCACTCTGTCCGATTACAACATCCAGAAAGAGTCC 51006785 Query 206365 ACTCTTCA 206372 ||||| || Sbjct 51006786 ACTCTCCA 51006793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181744499063919