Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq9 87.8 2e-12 >seq9 Length=97764462 Score = 87.8 bits (96), Expect = 2e-12 Identities = 180/264 (68%), Gaps = 4/264 (2%) Strand=Plus/Plus Query 25142 TAAAATTATATAAGTAGTTTTCAATTAA-ACAAC-ATGCAAGTGTTTGTAAAAACATTAA 25199 ||||||| | | ||| || |||||| | ||| ||||| | || || ||||| | | Sbjct 51006558 TAAAATTTTGT--GTATTTCTCAATTTTCAGAACCATGCAGATCTTCGTGAAAACTCTCA 51006615 Query 25200 CCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAA 25259 | || ||| | ||||| | ||||| || || || |||||||| | || || | Sbjct 51006616 CTGGCAAAACAATCACACTTGAAGTTGAGCCCTCAGACACTATCGAAAATGTTAAGGCTA 51006675 Query 25260 AAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAAC 25319 |||| || |||||||| || || || |||||||| | | || | | ||| |||| Sbjct 51006676 AAATCCAGGACAAAGAGGGAATCCCCCCAGATCAGCAGCGTTTGATCTTTGCCGGAAAAC 51006735 Query 25320 AACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATT 25379 | || ||||||| | | | | ||||||||| || || ||||| ||||| | |||| Sbjct 51006736 AGCTTGAAGATGGCCGCACTCTGTCCGATTACAACATCCAGAAAGAGTCCACTCTCCATT 51006795 Query 25380 TAGTGTTAAGATTGAGAGGAGGAA 25403 | || | | ||||||||||||| Sbjct 51006796 TGGTTCTTCGTTTGAGAGGAGGAA 51006819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445066364616480