Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq9 104 2e-17 >seq9 Length=97764462 Score = 104 bits (114), Expect = 2e-17 Identities = 167/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 39045 AAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTAT 39104 |||| | | || |||||||| || || | |||||||| || ||| |||||| || || Sbjct 51006830 AAATATCTGCATTCCTCCTCTCAAACGAAGAACCAAATGGAGAGTGGACTCTTTCTGGAT 51006771 Query 39105 ATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTG 39164 || ||||||| || || || | || ||||||||||| || ||||| || | |||||| Sbjct 51006770 GTTGTAATCGGACAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCAAAGATCAAACGCTG 51006711 Query 39165 CTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC 39224 ||| || | ||| | | |||||||||| |||||| || | | | | || || Sbjct 51006710 CTGATCTGGGGGGATTCCCTCTTTGTCCTGGATTTTAGCCTTAACATTTTCGATAGTGTC 51006651 Query 39225 GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||| || || | ||||| |||| || || || ||||| || ||||| ||||| Sbjct 51006650 TGAGGGCTCAACTTCAAGTGTGATTGTTTTGCCAGTGAGAGTTTTCACGAAGATCTGCAT 51006591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429519220396607