Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1597 89.7 5e-13 seq1 89.7 5e-13 >seq1597 Length=274804 Score = 89.7 bits (98), Expect = 5e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958 ||||||||||| || |||||||||||||||||||| || || || | || |||||| Sbjct 211909 TTTTCGTTAACTATTCCATCACTAGCAGCAAAGAAGGCTAGCACGTGAGAGATGAAATGT 211968 Query 23959 CTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCA 24018 || || || | | |||| ||| | | || || |||||||||||||| || Sbjct 211969 CTCTCGTCCTTCTTCAGATTTTCCCAGTGTGGCAAGTCCTTGGATAAATCAACTTCCTCG 212028 Query 24019 ACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATT 24078 ||||||| || |||| || ||| |||||| |||| ||||||| || || || Sbjct 212029 GCTGTCCAGAACGATGCCTCCGCCTTCTTGTACATTTGCCATATATCATGATACTGGATG 212088 Query 24079 GGAAATA 24085 || |||| Sbjct 212089 GGGAATA 212095 >seq1 Length=104615532 Score = 89.7 bits (98), Expect = 5e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958 ||||||||||| || || ||||| ||||||||||| || || |||| || |||||| Sbjct 19031148 TTTTCGTTAACTATTCCGTCACTGGCAGCAAAGAAGGCTAGCACATGAGAGATGAAATGT 19031089 Query 23959 CTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCA 24018 || || || | | |||| ||| | | || || |||||||||||||| || Sbjct 19031088 CTCTCGTCCTTCTTCAGATTTTCCCAGTGTGGCAAGTCCTTGGATAAATCAACTTCCTCG 19031029 Query 24019 ACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATT 24078 ||||||| || |||| || ||| |||||| |||| ||||||| || || || Sbjct 19031028 GCTGTCCAGAACGATGCCTCTGCCTTCTTGTACATTTGCCATATATCATGATACTGGATG 19030969 Query 24079 GGAAATA 24085 ||||||| Sbjct 19030968 GGAAATA 19030962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521455152774600