Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4423 82.4 6e-11 seq3699 82.4 6e-11 >seq4423 Length=7040 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 102035 TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094 || |||| |||||| || || | ||||||||| |||||||||||||| || || || || Sbjct 4394 TTGTATTGTGCTCCAAAGTGTCGCCACTGAAAACCATACACAGGTCCCAGGTCGCCCTCC 4453 Query 102095 TCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATG 102154 ||||||| | | |||| | ||||| || | || ||||| |||||||||||| Sbjct 4454 TCTCTGTGACCCAGACCACGGGAATCTAGGAACTCCCGTGAGCCATTAGCATCCCAAATG 4513 Query 102155 TGCAC 102159 || || Sbjct 4514 TGTAC 4518 >seq3699 Length=9427 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 102035 TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094 || |||| |||||| || || | ||||||||| |||||||||||||| || || || || Sbjct 322 TTGTATTGTGCTCCAAAGTGTCGCCACTGAAAACCATACACAGGTCCCAGGTCGCCCTCC 381 Query 102095 TCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATG 102154 ||||||| | | |||| | ||||| || | || ||||| |||||||||||| Sbjct 382 TCTCTGTGACCCAGACCACGGGAATCTAGGAACTCCCGTGAGCCATTAGCATCCCAAATG 441 Query 102155 TGCAC 102159 || || Sbjct 442 TGTAC 446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361154431979729