Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq61 87.8 2e-12 >seq61 Length=124260 Score = 87.8 bits (96), Expect = 2e-12 Identities = 122/168 (73%), Gaps = 6/168 (4%) Strand=Plus/Minus Query 24212 CTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGC 24271 |||||||||||| || |||| ||||| |||||| ||||| ||||| || || || Sbjct 5559 CTTTTTAAGCCAGAAAATGGCAGCAAAAGATCCACTGAAGAATATTCCCTCAACACTAGC 5500 Query 24272 AAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTC---ATGTATCCACTTTTGAGCCCA 24328 || ||||| | ||| ||| | ||| ||||| ||| ||||| || |||||| Sbjct 5499 GAATGCAATGACTCT--CTCGGGGAATGGC-CTGTCTGCATGCATCCATTTGAAAGCCCA 5443 Query 24329 ATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 || ||||||||||| | |||||||| ||||| || ||||| || || Sbjct 5442 CTCAGCCTTCTTTTTGATACAAGGCAGGGTCTCAATCGCATTGAATAG 5395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593558482411920