Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq13598 105 6e-18 >seq13598 Length=1024 Score = 105 bits (116), Expect = 6e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| || |||| || | |||||||||||| ||||||||| | Sbjct 52 CTCCTTCTGGATGTTGTAGTCACTCAGGGTCCTTCCATCCTCGAGCTGCTTTCCAGCGAA 111 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| | | ||| || || || || || ||||| ||||| || || || || | Sbjct 112 GATCAACCTCTGTTGGTCAGGGGGGATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATT 171 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| || ||| || ||| ||||||| ||| | |||||||| || || || || || Sbjct 172 CTCGATGGAGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTCAC 231 Query 118727 AAAAATCTGCATGGCT 118742 ||||||||||||||| Sbjct 232 GAAAATCTGCATGGCT 247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433714190257468