Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq13598 109 4e-19 seq18 100 2e-16 >seq13598 Length=1024 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| ||||||||||| |||| | | || || || || Sbjct 40 GTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGGGTCCTTCCATCCTCGAGCTG 99 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||| ||||| ||||||| ||||||||| || || | ||||| |||||| || || Sbjct 100 CTTTCCAGCGAAGATCAACCTCTGTTGGTCAGGGGGGATTCCCTCTTTGTCCTGGATCTT 159 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | ||| | ||| ||||| | ||| || || |||||||| Sbjct 160 GGCCTTGACATTCTCGATGGAGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTGCCCGT 219 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || |||||||| || || |||||| Sbjct 220 AAGGGTCTTCACGAAAATCTGCATG 244 >seq18 Length=176966 Score = 100 bits (110), Expect = 2e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 45197 CCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGC 45256 |||||||| ||||||| ||||||||| || || | |||||||||||| ||||| | Sbjct 84949 CCGGCGAAGATCAACCTCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGGATTTTGGCC 84890 Query 45257 TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGA 45316 ||||| | | | | ||| | | ||| ||||| | ||| || ||||| ||||| || Sbjct 84889 TTAACATTCTCGATGGAGTCACTAGGCTCAACCTCGAGGGTGATTGTCTTACCCGTGAGG 84830 Query 45317 GTCTTCACAAAGATTTGCAT 45336 ||||| |||||||||||||| Sbjct 84829 GTCTTGACAAAGATTTGCAT 84810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394969371576559