Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq61 84.2 3e-11 >seq61 Length=124260 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/168 (72%), Gaps = 6/168 (4%) Strand=Plus/Minus Query 50037 CTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGC 50096 |||||||||||| || |||| ||||| || ||| ||||| ||||| || || || Sbjct 5559 CTTTTTAAGCCAGAAAATGGCAGCAAAAGATCCACTGAAGAATATTCCCTCAACACTAGC 5500 Query 50097 AAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTC---ATGTATCCACTTTTGAGCCCA 50153 || |||| | ||||||| | |||| ||||| ||| ||||| || |||||| Sbjct 5499 GAATGCAATGA--CTCTCTCGGGGAATGGC-CTGTCTGCATGCATCCATTTGAAAGCCCA 5443 Query 50154 ATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 50201 || ||||||||||| | |||||||| || || || ||||| || || Sbjct 5442 CTCAGCCTTCTTTTTGATACAAGGCAGGGTCTCAATCGCATTGAATAG 5395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718071464625560