Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq13598 96.9 3e-15 >seq13598 Length=1024 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876 ||||| || | ||| || || |||| || | |||||| ||||| ||||| | ||| Sbjct 53 TCCTTCTGGATGTTGTAGTCACTCAGGGTCCTTCCATCCTCGAGCTGCTTTCCAGCGAAG 112 Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936 || || || || || || || || || || |||||||| | || || |||||||| Sbjct 113 ATCAACCTCTGTTGGTCAGGGGGGATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTC 172 Query 94937 CCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996 ||| | |||| | | || || || | ||||||||||| || ||||| || ||||| Sbjct 173 TCGATGGAGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTCACG 232 Query 94997 AAGATCTGCATGCTTACAACA 95017 || ||||||||| || |||| Sbjct 233 AAAATCTGCATGGCTATAACA 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448168037596440