Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8834 104 5e-17 seq7155 104 5e-17 seq6774 104 5e-17 seq4116 104 5e-17 seq1851 104 5e-17 seq615 104 5e-17 seq410 104 5e-17 seq11112 98.7 2e-15 seq2996 95.1 2e-14 seq532 89.7 1e-12 seq3556 87.8 4e-12 seq6348 86.0 1e-11 >seq8834 Length=2304 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 1652 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 1593 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 1592 CCCGCATCGGGC 1581 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 1916 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 1975 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 1976 CCCGCATCGGGC 1987 >seq7155 Length=3575 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 2947 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 3006 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 3007 CCCGCATCGGGC 3018 >seq6774 Length=4004 Score = 104 bits (114), Expect = 5e-17 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 3523 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 3582 Query 142564 CCCACATCGGGCAG--AAGTCGCCGTCTTTT 142592 ||| |||||||| | |||| | | |||||| Sbjct 3583 CCCGCATCGGGCTGCCAAGT-GGCTTCTTTT 3612 Score = 102 bits (112), Expect = 2e-16 Identities = 78/90 (87%), Gaps = 3/90 (3%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||||||||||||||||||||||| | ||||||||||||| | ||||| ||||||||||| Sbjct 3706 CCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGCC 3765 Query 142565 CCACATCGGGCAG--AAGTCGCCGTCTTTT 142592 || |||||||| | |||| | | |||||| Sbjct 3766 CCGCATCGGGCTGCCAAGT-GGCTTCTTTT 3794 >seq4116 Length=7787 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 2925 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 2866 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 2865 CCCGCATCGGGC 2854 >seq1851 Length=17985 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 9739 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 9798 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 9799 CCCGCATCGGGC 9810 >seq615 Length=44053 Score = 104 bits (114), Expect = 5e-17 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 36553 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 36494 Query 142564 CCCACATCGGGCAG--AAGTCGCCGTCTTTT 142592 ||| |||||||| | |||| | | |||||| Sbjct 36493 CCCGCATCGGGCTGCCAAGT-GGCTTCTTTT 36464 Score = 104 bits (114), Expect = 5e-17 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 36827 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 36886 Query 142564 CCCACATCGGGCAG--AAGTCGCCGTCTTTT 142592 ||| |||||||| | |||| | | |||||| Sbjct 36887 CCCGCATCGGGCTGCCAAGT-GGCTTCTTTT 36916 Score = 104 bits (114), Expect = 5e-17 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 37240 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 37181 Query 142564 CCCACATCGGGCAG--AAGTCGCCGTCTTTT 142592 ||| |||||||| | |||| | | |||||| Sbjct 37180 CCCGCATCGGGCTGCCAAGT-GGCTTCTTTT 37151 Score = 104 bits (114), Expect = 5e-17 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 37711 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 37652 Query 142564 CCCACATCGGGCAG--AAGTCGCCGTCTTTT 142592 ||| |||||||| | |||| | | |||||| Sbjct 37651 CCCGCATCGGGCTGCCAAGT-GGCTTCTTTT 37622 Score = 95.1 bits (104), Expect = 2e-14 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||||||||||||||||||||||| | ||||||||||||| | ||||| ||||||||| | Sbjct 37521 CCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGTC 37462 Query 142565 CCACATCGGG 142574 || ||||||| Sbjct 37461 CCTCATCGGG 37452 >seq410 Length=54290 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 52260 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 52201 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 52200 CCCGCATCGGGC 52189 >seq11112 Length=1516 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||||| |||||||||| Sbjct 1347 GCCCGGTTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGC 1406 Query 142564 CCCACATCGGGC 142575 ||| |||| ||| Sbjct 1407 CCCGCATCTGGC 1418 >seq2996 Length=10975 Score = 95.1 bits (104), Expect = 2e-14 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||| Sbjct 13 CCCGGTTAGCTCAGTCAGTAGAGCGCTAGACTCTTAATCTCGGGGTCGCGGGTTCGAGCC 72 Query 142565 CC 142566 || Sbjct 73 CC 74 >seq532 Length=47261 Score = 89.7 bits (98), Expect = 1e-12 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||||||||||||||| ||||||||| ||||||||||||| | ||||| ||||||||||| Sbjct 3948 CCCGGTTAGCTCAGTCAGTAGAGCGCGAGACTCTTAATCTCGGGGTCGCGGGTTCGAGCC 4007 Query 142565 CC 142566 || Sbjct 4008 CC 4009 >seq3556 Length=9576 Score = 87.8 bits (96), Expect = 4e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||| |||||||||| ||||||||||||| | |||||||||||||||| Sbjct 4147 GCCCGGCTAGCTCAGCTGGTAGAGCGCAAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 4206 Query 142564 CCC 142566 ||| Sbjct 4207 CCC 4209 >seq6348 Length=4638 Score = 86.0 bits (94), Expect = 1e-11 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||| Sbjct 3567 CCCGGTTAGCTCAGTCAGTAGAGCGCGAGACTCTTAATCTCAGGGTCGCGGGTTCGAGCC 3626 Query 142565 CC 142566 || Sbjct 3627 CC 3628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027547355054339