Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1090 100 5e-16 >seq1090 Length=28224 Score = 100 bits (110), Expect = 5e-16 Identities = 116/153 (76%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTC-TG 245061 ||||| | |||||| ||||| || ||||| || || | |||||||||||| | ||| || Sbjct 5111 ACCCTTTTCATGAACAGGTCAGGAATCCATAGAGCATAGAAGAGGTCCCTAG--CTCGTG 5168 Query 245062 -CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGG 245120 ||| ||| |||||| |||||||||| |||| |||||||| || || ||||||| | Sbjct 5169 CCTCCTCCTTGCCAGTATTCTTCCTCAAATCCAGGAAGTCAAACACATCCGCGTGCCAAG 5228 Query 245121 GCTCCATGTAGACAGCGAGGGCGCCGGGCCGCT 245153 | |||| || | ||||| | ||| || |||| Sbjct 5229 GTTCCAGATAAATAGCGAATGAGCCAGGTCGCT 5261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944079754609040