Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq18 86.0 1e-11 >seq18 Length=176966 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 || |||||||||| | |||||| | || ||||| || || ||||||||||| || Sbjct 84949 CCGGCGAAGATCAACCTCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGGATTTTGGCC 84890 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || || || || || || || || | || || ||||| ||||| ||||| || || || Sbjct 84889 TTAACATTCTCGATGGAGTCACTAGGCTCAACCTCGAGGGTGATTGTCTTACCCGTGAGG 84830 Query 288454 GTCTTGACGAATATCTGCAT 288473 |||||||| || || ||||| Sbjct 84829 GTCTTGACAAAGATTTGCAT 84810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179322202316762