Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq13598 102 8e-17 >seq13598 Length=1024 Score = 102 bits (112), Expect = 8e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| || | || || | ||| || ||||| ||||||||| | Sbjct 52 CTCCTTCTGGATGTTGTAGTCACTCAGGGTCCTTCCATCCTCGAGCTGCTTTCCAGCGAA 111 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 |||||| | ||| || || || || || ||||| |||||| ||| || ||||| | Sbjct 112 GATCAACCTCTGTTGGTCAGGGGGGATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATT 171 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| || ||| | ||| || |||| ||| | |||||||| || || || || || Sbjct 172 CTCGATGGAGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTCAC 231 Query 127102 AAAAATCTGCATGGCT 127117 ||||||||||||||| Sbjct 232 GAAAATCTGCATGGCT 247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475370162098960