Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq13598 120 7e-22 seq19535 84.2 5e-11 seq61 84.2 5e-11 >seq13598 Length=1024 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || |||||| |||| |||||||||| || ||||||||||| Sbjct 32 AGGACAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGGGTCCTTCCATCC 91 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||| | | ||| ||||| || ||||| ||| ||| Sbjct 92 TCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGGTCAGGGGGGATTCCCTCTTTGTCC 151 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| || ||| | | || || || | ||||| || Sbjct 152 TGGATCTTGGCCTTGACATTCTCGATGGAGTCACTGGGCTCAACCTCGAGGGTGATGGTT 211 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || ||||| ||||| || Sbjct 212 TTGCCCGTAAGGGTCTTCACGAAAATCTG 240 >seq19535 Length=5754 Score = 84.2 bits (92), Expect = 5e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 ||||| |||||||| ||||| ||||||||||| |||||||||||| | || | | Sbjct 2991 CTCAGCACAAGGTGCAGAGTGCTCTCCTTTTGGATGTTGTAGTCAGCTACAGATCGGTTA 3050 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 || || |||||||| ||||| ||||| || | ||| || || || ||| || |||| Sbjct 3051 TCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGTTGATCTGGTGGAATCCCCTCTCTA 3110 Query 199535 TCCTGAATCTTTTGCTTCA 199553 || || || | || |||| Sbjct 3111 TCTTGGATTCTCTGTTTCA 3129 >seq61 Length=124260 Score = 84.2 bits (92), Expect = 5e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 ||||| |||||||| ||||| ||||||||||| |||||||||||| | || | | Sbjct 92332 CTCAGCACAAGGTGCAGAGTGCTCTCCTTTTGGATGTTGTAGTCAGCTACAGATCGGTTA 92391 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 || || |||||||| ||||| ||||| || | ||| || || || ||| || |||| Sbjct 92392 TCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGTTGATCTGGTGGAATCCCCTCTCTA 92451 Query 199535 TCCTGAATCTTTTGCTTCA 199553 || || || | || |||| Sbjct 92452 TCTTGGATTCTCTGTTTCA 92470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178589608677593