Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq13598 100 3e-16 >seq13598 Length=1024 Score = 100 bits (110), Expect = 3e-16 Identities = 164/235 (70%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||||| || |||| | ||| | || || || | || |||||||| ||||| |||| Sbjct 10 ATTATTACCC-CCTCGGAGACGGAGGACAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGT 68 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || || | | || ||||||||||| || ||||| ||||| | ||| |||| Sbjct 69 AGTCACTCAGGGTCCTTCCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGGT 128 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | | ||| |||||| |||||| ||||| || | | | ||| || | Sbjct 129 CAGGGGGGATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGAGTCACTGG 188 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | ||||||||||||||||| || || || || || || ||||| Sbjct 189 GCTCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTCACGAAAATCTGCAT 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565083107815080