Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq13598 125 5e-24 seq19535 84.2 1e-11 seq61 84.2 1e-11 >seq13598 Length=1024 Score = 125 bits (138), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||||||||||||||| ||||| ||||| ||| | | |||| Sbjct 32 AGGACAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGGGTCCTTCCATCC 91 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| |||||||||| | || ||||| | || | ||||| ||||| Sbjct 92 TCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGGTCAGGGGGGATTCCCTCTTTGTCC 151 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || || ||| ||| ||| || || | ||| |||| Sbjct 152 TGGATCTTGGCCTTGAC--ATTCTCGATGGAGTCACTGGGCTCAACCTCGAGGGTGATGG 209 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || ||||| |||||||| || || ||||||||| Sbjct 210 TTTTGCCCGTAAGGGTCTTCACGAAAATCTGCATG 244 >seq19535 Length=5754 Score = 84.2 bits (92), Expect = 1e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||||||||||||| || ||||| | ||||||||||| || ||||| ||||| | | Sbjct 2979 CCACCCCTCAACCTCAGCACAAGGTGCAGAGTGCTCTCCTTTTGGATGTTGTAGTCAGCT 3038 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | || | ||| || || ||||| ||||| ||||| || | || || ||| | || Sbjct 3039 ACAGATCGGTTATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGTTGATCTGGTGGA 3098 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTT 34899 | |||||| | || | ||| | ||||| Sbjct 3099 ATCCCCTCTCTATCTTGGATTCTCTGTTT 3127 >seq61 Length=124260 Score = 84.2 bits (92), Expect = 1e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||||||||||||| || ||||| | ||||||||||| || ||||| ||||| | | Sbjct 92320 CCACCCCTCAACCTCAGCACAAGGTGCAGAGTGCTCTCCTTTTGGATGTTGTAGTCAGCT 92379 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | || | ||| || || ||||| ||||| ||||| || | || || ||| | || Sbjct 92380 ACAGATCGGTTATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGTTGATCTGGTGGA 92439 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTT 34899 | |||||| | || | ||| | ||||| Sbjct 92440 ATCCCCTCTCTATCTTGGATTCTCTGTTT 92468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325605556975001