Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq782 86.0 1e-11 >seq782 Length=37275 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 143985 GATCCAGTCTTGCATATAGAACTTAGGAGATGGGCTGATGTTTTTATTATAGCGCCCTTA 144044 || || ||| |||||||||| || || | |||||| ||| | | || |||| || || Sbjct 31686 GACCCTGTCCTGCATATAGAGCTCAGAAAATGGGCCGATATCATGGTTCTAGCACCACTA 31745 Query 144045 ACAGCAAATACGTTAGCAAAAATAGCCAATGGTATATGCGATAATTTACTAACATCTATA 144104 || || ||| ||| || | || |||||| | || || ||||| | |||| ||| Sbjct 31746 GATGCCAACACGCTAGGCAAGCTGGCTAATGGTCTCTGTGACAATTTGTTGACATGTATC 31805 Query 144105 GTAAGAGCCTGGGATATAAATAAACCTCTTATTTTTTGCCCCGCTATGAATACCCTTATG 144164 || |||||||| | ||||||| | | | ||||| ||||||||||| ||| Sbjct 31806 ACCAGGGCCTGGGACCCATCTAAACCTGTCCTAATCTGCCCAGCTATGAATACTGCGATG 31865 Query 144165 TGGGAACATCCT 144176 |||||||||||| Sbjct 31866 TGGGAACATCCT 31877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981550711630881