Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq13598 122 8e-23 seq2440 91.5 1e-13 >seq13598 Length=1024 Score = 122 bits (134), Expect = 8e-23 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||| ||| ||||| || ||||| || | || || |||||||||||||| || Sbjct 46 GGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGGGTCCTTCCATCCTCGAGCTGCTTTCC 105 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || ||| ||||| || ||||| || || ||||| |||||| ||| Sbjct 106 AGCGAAGATCAACCTCTGTTGGTCAGGGGGGATTCCCTCTTTGTCCTGGATCTTGGCCTT 165 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | | ||| ||||||| || |||| ||||| ||||||||| || || || Sbjct 166 GACATTCTCGATGGAGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGT 225 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || |||||||||||||||||| Sbjct 226 CTTCACGAAAATCTGCATGGCT 247 >seq2440 Length=13695 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 133542 TGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCG 133601 ||||| || ||||| || || ||||| |||||| ||||| | ||| | | ||| Sbjct 1 TGGTCAGGGGGGATTCCCTCTTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGAGTCA 60 Query 133602 GTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||||||| || |||| ||||| ||||||||| || || || || ||||||||||||||| Sbjct 61 CTGGGCTCAACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACGAAAATCTGCATG 120 Query 133662 GCT 133664 ||| Sbjct 121 GCT 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483287986177960