Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq334 93.3 4e-14 >seq334 Length=60703 Score = 93.3 bits (102), Expect = 4e-14 Identities = 244/368 (66%), Gaps = 6/368 (2%) Strand=Plus/Minus Query 135317 GAATTGGCGGACAATTTTTGTTATTATAACAAACATTATGATTGCATAGAAGGTGCTCCG 135376 ||| || ||||||| | ||| || || ||| || | |||||| ||| | |||||||| Sbjct 60145 GAAATGTCGGACAACTATTGCTACTACAACGAAAACTATGATAACATTAACGGTGCTCCA 60086 Query 135377 GCATGGGCGCAACAAACTTTGCACGCTCACGCCTCTGATCGCA-GAGACTTTTGTTACAC 135435 | ||||| | | || | | || || ||||| || | || | | || || Sbjct 60085 GATTGGGCACGTGAGACCCTTGAAAAACATGCTTCTGA-CGAACGACAATGGGTGTATAC 60027 Query 135436 GCGCGAGCAATGGGACCAAGCGTTGACGCATGACCCGTTGTGGAACGCGGCACAACGGCA 135495 | | || |||||||| ||||| || |||||| | ||||| || ||||| || Sbjct 60026 GTGTGAACAATGGGAAAAAGCGGAAACCCATGACAACCTATGGAATGCAGCACAGTTACA 59967 Query 135496 GCTTAAGCGAGAAG--GCAAAATGCACGGATTTATGCGCATGTATTGGGCAAAAAAGATA 135553 || | || ||| | ||||||||||| | |||||| ||||||||||| || ||||| Sbjct 59966 ACTC--GTGAAAAGTGGGAAAATGCACGGGTATATGCGGATGTATTGGGCTAAGAAGATC 59909 Query 135554 TTGGAATGGTCTGCATCGCCTGCAGAGGCGCTACAACACGCAATATTTTTTAATGATTAC 135613 ||||| ||||| || | ||| |||||| | | | | | || || ||| | Sbjct 59908 TTGGAGTGGTCCGCGACACCTAAAGAGGCAATCGAGATTGGGGTGTACTTGAACGATAAA 59849 Query 135614 TACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGGTTGTATGTGGTCTATTTGCGGT 135673 | ||| ||||||||| || ||||| || | ||| |||||||||||| ||| Sbjct 59848 TTCAGCTTAGATGGAGCAGACTCAAACGGTTTTAACGGTGTAATGTGGTCTATTGCGGGT 59789 Query 135674 GTACACGA 135681 || ||||| Sbjct 59788 GTTCACGA 59781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434798911606080