Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq13598 107 5e-18 seq19535 89.7 1e-12 seq61 89.7 1e-12 >seq13598 Length=1024 Score = 107 bits (118), Expect = 5e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || ||| || || |||| ||||| || || || || ||||| Sbjct 32 AGGACAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGGGTCCTTCCATCC 91 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | | |||||||| || || || || || ||||| Sbjct 92 TCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGGTCAGGGGGGATTCCCTCTTTGTCC 151 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||| ||| || || || || | ||||| || Sbjct 152 TGGATCTTGGCCTTGACATTCTCGATGGAGTCACTGGGCTCAACCTCGAGGGTGATGGTT 211 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || || | ||| | ||||| Sbjct 212 TTGCCCGTAAGGGTCTTCACGAAAATCTGCAT 243 >seq19535 Length=5754 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 ||||| |||||||| |||||| || ||||||| ||||| || || | || || | Sbjct 2991 CTCAGCACAAGGTGCAGAGTGCTCTCCTTTTGGATGTTGTAGTCAGCTACAGATCGGTTA 3050 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 || || ||||||||||| || |||||||| | ||||| || || ||||| || || | Sbjct 3051 TCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGTTGATCTGGTGGAATCCCCTCTCTA 3110 Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGT 225650 |||||||| | || |||| | ||||||| Sbjct 3111 TCTTGGATTCTCTGTTTCAACTCCCCGATGGT 3142 >seq61 Length=124260 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 ||||| |||||||| |||||| || ||||||| ||||| || || | || || | Sbjct 92332 CTCAGCACAAGGTGCAGAGTGCTCTCCTTTTGGATGTTGTAGTCAGCTACAGATCGGTTA 92391 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 || || ||||||||||| || |||||||| | ||||| || || ||||| || || | Sbjct 92392 TCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGTTGATCTGGTGGAATCCCCTCTCTA 92451 Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGT 225650 |||||||| | || |||| | ||||||| Sbjct 92452 TCTTGGATTCTCTGTTTCAACTCCCCGATGGT 92483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192195376133426