Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq4423 84.2 2e-11 >seq4423 Length=7040 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/147 (73%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 27470 TCCCCGAGTAGTC--TACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAA 27527 |||||| |||||| || ||| || || |||| | |||||| || || | ||||||||| Sbjct 6334 TCCCCGTGTAGTCCGTATCCTTAT--CCTTGTATTGTGCTCCAAAGTGTCGCCATTGGAA 6391 Query 27528 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 27587 || ||||| ||||||||||| ||||| |||||||| | | || | || | || Sbjct 6392 GCCATACACAGGTCCCAGGTCGCCCTCCTCCCTGTGACCCAGACCACGGGAATCTAGGAA 6451 Query 27588 GTCTCTGGAACCGTTGGCGTCCCAGAT 27614 || | || ||||| ||||||||||| Sbjct 6452 CTCCCGTGAGCCGTTAGCGTCCCAGAT 6478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369408220452749