Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq13598 132 1e-25 seq18 100 6e-16 >seq13598 Length=1024 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || || || || || || | ||||| || || ||||||||||||||| Sbjct 16 ACCCCCTCGGAGACGGAGGACAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCACT 75 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | |||||||| || || || || || |||||||| | ||||||||| || Sbjct 76 CAGGGTCCTTCCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGGTCAGGGGG 135 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||| ||||| |||||||| || || || | ||||| | ||| | || || Sbjct 136 GATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGAGTCACTGGGCTCAAC 195 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| || || ||||| | ||||| ||||| |||||||| Sbjct 196 CTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTCACGAAAATCTGCAT 243 >seq18 Length=176966 Score = 100 bits (110), Expect = 6e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 ||||| |||||||| | ||||||||| ||||| ||||||||||| ||||| || || Sbjct 84949 CCGGCGAAGATCAACCTCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGGATTTTGGCC 84890 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || || | ||||| | ||| || || || ||||| ||||| ||||||||||| | Sbjct 84889 TTAACATTCTCGATGGAGTCACTAGGCTCAACCTCGAGGGTGATTGTCTTACCCGTGAGG 84830 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| || || || ||||| Sbjct 84829 GTCTTGACAAAGATTTGCAT 84810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046444432026266