Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq13598 95.1 9e-15 seq19535 91.5 1e-13 seq61 91.5 1e-13 >seq13598 Length=1024 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 ||||||| || | | || |||||||| ||||||||||| ||||||||||| || Sbjct 17 CCCCCTCGGAGACGGAGGACAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCACTC 76 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 || || || | || || |||||||| || || |||||||| | ||| || || | | Sbjct 77 AG--GGTCCTTCCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGGTCAGGGG 134 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | || || || ||| ||||| ||| | | | |||| ||| || || | Sbjct 135 GGATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGAGTCACTGGGCTCAA 194 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| | || || || || ||||| |||||||||||||| || |||||| Sbjct 195 CCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTCACGAAAATCTGCATG 244 >seq19535 Length=5754 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || |||| |||| ||| ||||| || ||||||||||||||||||||||| || || Sbjct 2979 CCACCCCTCAACCTCAGCACAAGGTGCAGAGTGCTCTCCTTTTGGATGTTGTAGTCAGCT 3038 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | || | || || |||||||||||||||||||| | | ||| ||||||| Sbjct 3039 ACAGATCGGTTATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGTTGATCTG 3093 >seq61 Length=124260 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || |||| |||| ||| ||||| || ||||||||||||||||||||||| || || Sbjct 92320 CCACCCCTCAACCTCAGCACAAGGTGCAGAGTGCTCTCCTTTTGGATGTTGTAGTCAGCT 92379 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | || | || || |||||||||||||||||||| | | ||| ||||||| Sbjct 92380 ACAGATCGGTTATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGTTGATCTG 92434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359893969709043