Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq117 246 4e-60 seq99 150 2e-31 >seq117 Length=549210 Score = 246 bits (272), Expect = 4e-60 Identities = 1126/1775 (63%), Gaps = 28/1775 (2%) Strand=Plus/Plus Query 52798 CTTGTCCAATGTGAA-TTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856 |||||||| ||||| |||| | | || |||| || || || || |||||||| | Sbjct 312223 CTTGTCCACCGTGAACTTGATCGCGCTCGCG-GCGGCCTTTGTGCGCAGGTAGTACATGC 312281 Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916 | || || | || |||| |||| || ||||| || || || |||| ||| ||| Sbjct 312282 CGGTCTTCACGCCCTTCTTCCACGCGTAGAAGTGCATGCTGGTAAGCTTGGCGTAATTCG 312341 Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976 | || || | || ||||||| || ||||| || ||||||||||| || | || |||| Sbjct 312342 GCTCGGCGAGGTGAATATTCAGTGACTGACTCTGGTCGATGAAGGCGCCGCGATCGGCAG 312401 Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 53036 |||| || || |||||||| || | || ||||| | || || || | |||| | | Sbjct 312402 CCATGTTGATTATCGTCTTCTGCGAGATCTCCCAGACGGTCTTGTAGAGCTGCTTCAGGT 312461 Query 53037 CTTCTGGAAGGTT-TGTA--TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093 | || || | | | | ||||||| || || || | || || | ||||| | Sbjct 312462 CGTCCGGGATCTCCTCGACGTTCTGAACGGAGCCGTTCTCGGCGATGATGCGGTTCTTCA 312521 Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 53153 | | || | ||| | | |||||| | | | || || || | || || | | Sbjct 312522 TGTGGTCGTCCCACAGGCCGCACTCGGTGAGGTCCTTCAGCAGGTGGTGGTTGACGATCT 312581 Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213 | || || || || | || | ||| | ||| || || || || |||| || | |||| Sbjct 312582 GGAACTCGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCTCGTGTACGCCTCGATCGACT 312641 Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273 |||| || || | || || || || || || |||||||| || || | || | || | Sbjct 312642 CATTGTTGCCGAGGATCTGTGCCGTCGACGCGGTCGGCATCGGCGCGAGCAGCAGGCTGT 312701 Query 53274 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 53333 | | | |||| | ||| || | || || | ||| | ||| || || | | Sbjct 312702 TGCGGACGCCGTGAGCGGCGATCTTCGCCTTGAGCGCGCTCCAGTCCCAGAGGTCGGTGG 312761 Query 53334 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 53393 | || || || | || || ||| || | || | || | Sbjct 312762 GGGTCACGCCCCACATGTCGTACTGCAGGACGCCCTTGCTGACGGGGCAGCCGGCGTACG 312821 Query 53394 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 53453 | ||||| || || |||||| || || || || |||||||| | || ||||| || | Sbjct 312822 TCTCGTAGGGGCCAAGCTTCTCCGCGAGCTCGCAGCTCGCCTCCAGCGCGCCGTAGTATA 312881 Query 53454 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 53513 | | ||||| |||| ||| || || || |||| | ||| || || || | | Sbjct 312882 TCGACTCGAATATCTGCTTGTTGAGCAGCTGGGCTTGCTCGCTCTCGAACGGCAAGCGCA 312941 Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573 ||| || |||||||| || | || ||||| || || ||||| || | || | | | | Sbjct 312942 TGAGGATGAACGCGTCGGCGAGACCCTGAACGCCGATGCCGATCGGACGGTGGCGCATGT 313001 Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633 | || || || || || || | || || || || || || |||||||| | Sbjct 313002 TCGATCGGCGCGCCTCCTCAACCGGGTAGAAGTTGATGTCGATGATCTTGTTGAGGTTGC 313061 Query 53634 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA----TTGTCCATCTATT 53689 || || || ||| |||||||| ||| | || || | |||||| | Sbjct 313062 GCGTGATGACCTTCGTCACGTCCTTCAGCTTGCGGAAGTCGTACGTCTTGTCCG-CGCGC 313120 Query 53690 ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 53749 || ||||||| | || | || || || || || ||||| ||||| | || Sbjct 313121 ACGTACATGTTGAGCGCGACCGAGGCGAGGTTGCAGACGGCCGTCTCATCGGGCGACGAG 313180 Query 53750 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 53809 || | | || || ||||| || || || ||||| ||||| || | || || || || Sbjct 313181 TACTCGACGATTTCCGTGCACAGGTTGCTGCACTTAATGGTGCCGAGGTTCTGCTGGTTC 313240 Query 53810 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGAT 53869 ||| || ||||| ||||| || || ||| | || || || ||||| |||| ||| Sbjct 313241 GACTTGCGATTGCACGCGTCCTTGTAGAGCATGTAGGGAGTTCCCGTTTCCGTCTGCGAT 313300 Query 53870 TCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCT- 53928 || || || || | ||| | | || || || | | | | |||| | || Sbjct 313301 TCCATGATGGCGTACCACAGCTGCTGTGCTTTGATCGTCCTTCT----CACTTTGCCCTG 313356 Query 53929 ---TTCGTA--TAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCA 53983 |||||| | ||||| | | ||| || ||||| ||||| | | |||| || Sbjct 313357 CTTTTCGTACTTGGTGTAGAGAGC--TTCGAATTCGTCGCCCCAGCAGTCGGCCAAGCCC 313414 Query 53984 GGACATTCATCCGGACACATCAACGACCACTC-TCCGTCA-TCCTTCACTCGTTTCATAA 54041 || ||||| |||||||||| | ||||| || | | | | | | ||||| ||| | Sbjct 313415 GGGCATTCCGCCGGACACATGAGAGACCAGTCCTGATTGAGTTCGACCCTCGT--CATGA 313472 Query 54042 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 54101 | ||||| || ||||| || | || || ||||| | || |||||||| || || | Sbjct 313473 ACAGATCCGGGATCCAGAGCCCGTAGAACAGGTCTCTCGCTCGCTGTTCCTCCTTCCCGG 313532 Query 54102 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 54161 | ||||| || ||||| ||| | | || || | |||||||| || | ||| || | Sbjct 313533 TGTTCTTCTTGCAGTCGAGAAACTCGAAGATGTCCGCGTGCCACGGCTCGAGGTACATCG 313592 Query 54162 TCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 54221 | | || || || ||||| || ||||| || | ||| || || |||||||| | | Sbjct 313593 CAAAGGCGCCCGGACGCTTGTTGCCGCCCTGGTCGACGTACCTCGCCGTGTTATTGAAGA 313652 Query 54222 CTCTCAACATTGGAATAATACCATTGGATGCA-CCATTGGTCCCGGAGATATAGCTTCCA 54280 ||| || ||| |||| | || || || ||| || ||||| |||| ||| |||||||| Sbjct 313653 CTCGCAGCATGGGAAGGAGGCCGTTCGA-GCAGCCGTTGGTGCCGGCGATGTAGCTTCCC 313711 Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340 ||| || || || || | || || || ||||| || || || | ||| Sbjct 313712 GAGGCGCGGATGTTGTGTATGTTGACGCCGATGCCTCCTGCGGACTTCGATATGAGCGCG 313771 Query 54341 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 54400 ||| || | ||| || ||||||||||| || || || ||| |||| | || || || Sbjct 313772 CATTCCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATCGTCAGCAGGAAG 313831 Query 54401 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 54460 ||||| || | || |||| || || || || || | || || || |||||||| Sbjct 313832 CAGCTGGAGAGCTGCGGACGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTG 313891 Query 54461 AACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGA 54520 ||||| || || || || || |||||||||||||| || ||| || |||| || || Sbjct 313892 AACCACTTCTCCGACAGCAGGTTGTACGTCTCGATGGCGCTGTCGATGTCCCTCTGGTGG 313951 Query 54521 ATTCCTACTGCGACACGCATTAACATGTGCTGAGG 54555 || || || | || | ||| | ||| ||||| || Sbjct 313952 ATCCCGACGGACACCCTCATGAGCATCTGCTGGGG 313986 >seq99 Length=602874 Score = 150 bits (166), Expect = 2e-31 Identities = 155/200 (78%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 24521 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 24580 |||||||||||| ||||| ||||| || || ||||||||||| || ||| ||| || | Sbjct 458792 ATTTTCATTCACAATTCCATCACTTGCAGCGAAAAACGCCAACACGTGTGATATGAAGTG 458851 Query 24581 TTTTTCGTCTGGTGTT-AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTT 24639 || || || ||| || ||||| | ||||||| | | |||||| | || || |||| Sbjct 458852 TTGCTCCTC-GGTCTTCAGTTTGTCCCAATCAGTCAAATCTTTGCTGAGGTCTACCTCTT 458910 Query 24640 CCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAA 24699 ||||||||||||| ||||||||||| || || ||||| | ||||||||||||||| | | Sbjct 458911 CCACTGTCCAAAAGGATGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGATACTTGA 458970 Query 24700 TTGGAAAAATAACAAATCTA 24719 | || |||| ||||| ||| Sbjct 458971 TGGGGAAAAGTACAAACCTA 458990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593279373887760