Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1300 143 3e-29 seq7865 131 2e-25 >seq1300 Length=83366 Score = 143 bits (158), Expect = 3e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| ||||||||| | || || || || | Sbjct 7892 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCTTAGAAGTAGAGGCATCT 7951 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| || | | ||||| | |||| ||||| | ||||| ||||| |||||| |||| || Sbjct 7952 GACTGCATTGAAAACG-TGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCA 8010 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| ||| || ||||||||||| || | ||||| || ||||||||| Sbjct 8011 ACAGCGCCTGATCTTCGCCGGAAAACAGCTGGAAGATGGCCGCACTCTGTCCGACTACAA 8070 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | || || || || || |||| Sbjct 8071 CATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCG 8106 Score = 136 bits (150), Expect = 4e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || ||||| || || || || || ||||||||| | || || || || Sbjct 7661 AATATGCAGATCTTTGTAAAGACCCTGACTGGTAAGACCATCACCTTGGAAGTAGAGGCA 7720 Query 40747 ACCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||||| | | ||||| | |||| ||||| | ||||| ||||| |||||| |||| Sbjct 7721 TCTGACAGCATTGAAAACG-TGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGA 7779 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 || || || || |||| ||| || || |||||||| || | ||||| || |||||| Sbjct 7780 TCAACAGCGCCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTGTCCGACTA 7839 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||||| | || || || || || |||| || | || ||| Sbjct 7840 CAACATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCGTGGAGGC 7891 >seq7865 Length=4356 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||||| || |||||||||||| | || ||||| || | Sbjct 3592 ATGCAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTCGAGGCAAGT 3533 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | || ||| | | |||| || || | |||||||||||||||||| |||| || Sbjct 3532 GATTCGATTGAAAATG-TGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCGGATCA 3474 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || ||||| |||||||| || | ||||| || | |||||||| Sbjct 3473 GCAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAA 3414 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | || || || || || |||| Sbjct 3413 CATCCAGAAGGAGTCTACCCTTCACCTGGTCCTGCG 3378 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||||| || |||||||||||| | || || || || | | Sbjct 3820 ATGCAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTAGAGGCAAGC 3761 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | ||| | |||| || || | |||||||||||||||||| | || ||| Sbjct 3760 GATTCAATCGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGATCAG 3701 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || ||||| |||||||| || | ||||| || | ||||||||| Sbjct 3700 CAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAAC 3641 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | || || || || || |||| || | || ||| Sbjct 3640 ATCCAGAAGGAGTCTACCCTTCACCTTGTCCTGCGTCTGCGTGGTGGC 3593 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 |||||||||||||||||| |||| ||||| | | |||| || ||||| |||||||| Sbjct 3955 GACAAAGAGGGCATCCCCCCGGATCAGCAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAA 3896 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | ||||| || | ||||||||||||||||||||| | || || || || || || Sbjct 3895 GATGGTCGCACTCTGAGTGACTACAACATCCAGAAGGAGTCTACCCTTCACCTGGTCCTG 3836 Query 40903 CGCTTGAGGGGCGGC 40917 || || | || ||| Sbjct 3835 CGTCTGCGTGGTGGC 3821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514835445419120