Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq907 105 8e-18 seq855 104 3e-17 seq56 96.9 4e-15 seq1048 95.1 1e-14 seq524 95.1 1e-14 seq892 93.3 5e-14 seq82 91.5 2e-13 seq291 87.8 2e-12 >seq907 Length=127691 Score = 105 bits (116), Expect = 8e-18 Identities = 73/83 (88%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| ||||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 81046 AAAAATTTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 81105 Query 60118 CACCACTATACTACCGAGGATTG 60140 |||||||||||| ||||||||| Sbjct 81106 GACCACTATACTATCGAGGATTG 81128 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/89 (82%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 60056 GAAAAATTTTCT-CCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 || ||| ||||| || || | |||||| |||||| |||||||||| ||||| ||| || Sbjct 97764 GACAAAATTTCTGCCCCGACGGGGAATTGAACCCCGGTCTCCCGCATGACAAACGGGGAT 97823 Query 60115 ACTCACCACTATACTACCGAGGATTGAAT 60143 ||| |||||||||||| ||||||||| || Sbjct 97824 ACTAACCACTATACTATCGAGGATTGGAT 97852 >seq855 Length=144298 Score = 104 bits (114), Expect = 3e-17 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| || |||||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 20646 AAACATGTTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 20587 Query 60117 TCACCACTATACTACCGAGGATTGAATATATA 60148 | |||||||||||| |||||| || | ||||| Sbjct 20586 TAACCACTATACTATCGAGGAATGTACATATA 20555 Score = 104 bits (114), Expect = 3e-17 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| || |||||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 23476 AAACATGTTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 23417 Query 60117 TCACCACTATACTACCGAGGATTGAATATATA 60148 | |||||||||||| |||||| || | ||||| Sbjct 23416 TAACCACTATACTATCGAGGAATGTACATATA 23385 Score = 102 bits (112), Expect = 9e-17 Identities = 101/127 (80%), Gaps = 3/127 (2%) Strand=Plus/Minus Query 60024 ATGTAATCAGATAACAACA-AATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATC 60082 ||||||| || || |||| || ||| || ||| | | | |||||| || | |||||| Sbjct 28542 ATGTAAT-AGTTATGAACATAAATAAAATTAATGTATA-TGTTCTCCCCGACGGGGAATT 28485 Query 60083 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTGAA 60142 |||||| ||||||||||||||||||||| ||||| |||||||||||| |||||| || | Sbjct 28484 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTATACTAGCGAGGAATGTA 28425 Query 60143 TATATAA 60149 ||| || Sbjct 28424 CATAAAA 28418 Score = 98.7 bits (108), Expect = 1e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| || |||||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 25032 AAACATGTTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 24973 Query 60117 TCACCACTATACTACCGAGGATTGAATATATA 60148 | |||||||||||| |||||| || | | ||| Sbjct 24972 TAACCACTATACTATCGAGGAATGTACACATA 24941 Score = 98.7 bits (108), Expect = 1e-15 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 |||||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 26248 TTTTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACC 26189 Query 60122 ACTATACTACCGAGGATTG 60140 ||||||||| |||||| || Sbjct 26188 ACTATACTATCGAGGAATG 26170 >seq56 Length=829856 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 476428 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 476369 Query 60126 TACTACCGAGGATTGA 60141 ||||| |||||||||| Sbjct 476368 TACTATCGAGGATTGA 476353 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 475305 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 475246 Query 60126 TACTACCGAGGATT 60139 ||||| |||||||| Sbjct 475245 TACTATCGAGGATT 475232 >seq1048 Length=107614 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 77904 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 77845 Query 60125 ATACTACCGAGGATT 60139 |||||| |||||||| Sbjct 77844 ATACTATCGAGGATT 77830 >seq524 Length=218489 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 39567 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 39508 Query 60124 TATACTACCGAGGAT 60138 ||||||| ||||||| Sbjct 39507 TATACTATCGAGGAT 39493 >seq892 Length=132023 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60059 AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 ||| ||||||| | | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 37892 AAAATTTCTCCCCAACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTA 37951 Query 60119 ACCACTATACTACCGAGGATT 60139 |||||||||||| ||||||| Sbjct 37952 ACCACTATACTATTGAGGATT 37972 >seq82 Length=757965 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 652171 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 652112 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 652111 TACTATCGAGGAT 652099 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||| ||||||||||||| ||||| ||||||| Sbjct 653579 CTCCCCGACGGGGAATTGAACCCAGGTCTCC-GCGTGACAGGCGGGGATACTAACCACTA 653521 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 653520 TACTATCGAGGAT 653508 >seq291 Length=319556 Score = 87.8 bits (96), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135 |||||| |||||| ||||||||||||||||||||| ||||| |||||||||||| |||| Sbjct 317207 GGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTATACTATCGAG 317266 Query 60136 GAT 60138 ||| Sbjct 317267 GAT 317269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571391688808360