Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq117 116 8e-21 >seq117 Length=549210 Score = 116 bits (128), Expect = 8e-21 Identities = 351/541 (65%), Gaps = 11/541 (2%) Strand=Plus/Minus Query 248872 GGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAG 248931 |||||| | | ||| || ||||| ||| | ||| | ||| | |||||||| ||| || Sbjct 314004 GGCAAGGTGGCGGAGCGTCCCCAGCAGATGCTCATGAGGGTGTCCGTCGGGATCCACCAG 313945 Query 248932 GATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACAT 248991 ||||| || |||| |||||||||||| | || || ||| | || || Sbjct 313944 AGGGACATCGACAGCGCCATCGAGACGTACAACCTGCTGTCGGAGAAGTGGTTCACGCAC 313885 Query 248992 GCCACACCGACGCTCTTCAACGCCGGTAC----CGTCAACAATCAGCTGAGCTCGTGCTT 249047 || | |||||||||||||||||||| || |||| ||||| | ||||| Sbjct 313884 GCGTCGCCGACGCTCTTCAACGCCGGCACGCCGCGTC----CGCAGCTCTCCAGCTGCTT 313829 Query 249048 TCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGC 249107 || || | ||| | |||||| |||| ||||| || |||||||| || | || Sbjct 313828 CCTGCTGACGATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAGGAATGCGC 313769 Query 249108 GAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGG 249167 | || || || | ||| || || ||||| || | | ||||||||| || ||| Sbjct 313768 GCTCATATCGAAGTCCGCAGGAGGCATCGGCGTCAACATACACAACATCCGCGCCTCGGG 313709 Query 249168 TTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTT 249227 |||||| || || || || | | || || | ||| | || ||| ||| Sbjct 313708 AAGCTACATCGCCGGCACCAACGGCTGCTCGAACGGCCTCCTTCCCATGCTGCGAGTCTT 313649 Query 249228 TGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCAT 249284 | ||| || |||| | || |||||| ||| | || ||| | || || || Sbjct 313648 CAATAACACGGCGAGGTACGTCGACCAGGGCGGCAACAAGCGTCCGGGCGCCTTTGCGAT 313589 Query 249285 GTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGG 249344 ||| | || ||||||||| || || || ||||| || |||| || ||||||| ||| Sbjct 313588 GTACCTCGAGCCGTGGCACGCGGACATCTTCGAGTTTCTCGACTGCAAGAAGAACACCGG 313529 Query 249345 CAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCAT 249404 || ||| | ||||| | ||||| |||||||| || ||| || | || ||||||| Sbjct 313528 GAAGGAGGAACAGCGAGCGAGAGACCTGTTCTACGGGCTCTGGATCCCGGATCTGTTCAT 313469 Query 249405 G 249405 | Sbjct 313468 G 313468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1072946623982016