Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq99 98.7 1e-15 >seq99 Length=602874 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 14589 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14648 ||| ||||||||| || || |||||||| || || ||||| ||||| | || | || | Sbjct 458788 CCAGATTTTCATTCACAATTCCATCACTTGCAGCGAAAAACGCCAACACGTGTGATATGA 458847 Query 14649 AGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTT 14708 ||| |||||| || | | ||||| | |||||| | ||||| || || ||||| | Sbjct 458848 AGTGTTGCTCCTCGGTCTTCAGTTTGTCCCAATCAGTCAAATCTTTGCTGAGGTCTACCT 458907 Query 14709 CATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14768 | || ||||||||||| || | ||||| || |||||| ||| || || | ||| Sbjct 458908 CTTCCACTGTCCAAAAGGATGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGATACT 458967 Query 14769 ATATAGGAAAAACTACAAATCT 14790 || || |||| |||||| || Sbjct 458968 TGATGGGGAAAAGTACAAACCT 458989 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 ||||||||||||| || || || || || || | || |||||||| || ||||||| Sbjct 457837 CCTCATCTCTACTGATGAGCTCATTGCTGAAGGTCAGACCAGGCATCAAGCCACGTTTTT 457896 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGC 14337 | | ||| ||||| ||||| ||||| || || ||||| |||||||| || || Sbjct 457897 TCAGCCAGAATATAGCAGCAAATGACCCTGAGAAGAAGATTCCCTCGACAGC 457948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481986330909160