Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq28891 663 0.0 seq48058 403 2e-107 >seq28891 Length=398 Score = 663 bits (734), Expect = 0.0 Identities = 387/399 (97%), Gaps = 1/399 (0%) Strand=Plus/Plus Query 115064 AGTATTAATATTTTCTTGTACaaatttaaactgtattttaattcctttttctaaaaaatt 115123 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 1 AGTATTAATATTTTCTTGTACAAATTTAAACTGTATCTTAATTCCTTTTTCAAAAAAATT 60 Query 115124 tttatacaactttgttctttttaaaagctttaaaCGATTCAACGCTGCCTTTACAAATAA 115183 |||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 61 TTTATATAACTTTGTTCTTTTTAAA-GCTTTAAACGATTCAACACTGCCTTTACAAATAA 119 Query 115184 TTTTTATTCTTTCAttttttttGGGATCAAGGACTAATGTCGAAAAATCAGATATTTTAA 115243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 TTTTTATTCTTTCATTTTTTTTGGGATCAAGGACTAATGTCGAAAAATCAGATATTTTAA 179 Query 115244 CATTAATAGTACGCATTTTTGGAATATCAAGTAtttttttAACCATCAATGGATATTCTC 115303 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 180 CATTAATAGTACGCATTTTTGGAATATCAAGTATTTTTTTAACCATCAATGGATACTCTC 239 Query 115304 CAATTTCTGGATCATTAAAAATTAATAATAATAAACCATTATCTTCACTTTCTCCAAATG 115363 |||||| || | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 CAATTTTTGAACCATTAAAAATTAATAATAATAAACCATTATCTTCACTTTCTCCAAATG 299 Query 115364 CATGTTGAATAACACTTCCTGGGTAAAAAATAtttttttGAGGTCGTTGTTCACTATGTA 115423 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 300 CATGTTGAATAACACTTCCTGGATAAAAAATATTTTTTTGAGGTCGTTGTTCACTATGTA 359 Query 115424 TATGTCCACTAATCACTAATGGAAAAGAGTGGTCCCATT 115462 |||||||||||||||||||||||||||| || ||||||| Sbjct 360 TATGTCCACTAATCACTAATGGAAAAGAATGATCCCATT 398 >seq48058 Length=252 Score = 403 bits (446), Expect = 2e-107 Identities = 237/246 (96%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 150131 TCTTCTTCGTCCCTCTTGACGGTTAGCGTTTTGCAAAATAGTTTCTCTGGTATTGGGAGA 150190 ||||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||| Sbjct 248 TCTTCTTCGTCTATCTTGACGGTTAGCGTTTTGTAAAATAGTTTCTCGGGTATTAGGAGA 189 Query 150191 GTGATTTGGTGTTGTAACTGATTCATGAATAAAATCAATAAAATCACTTTTTCTCATTTT 150250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 188 GTGATTTGGTGTTGTAACTGATTCATGAATAAAATCAATAAAATCACTTTTTCTCATTTT 129 Query 150251 AGAAATTGGTCTTTCATGATATCCATTATAAATTCTGTATGAGATTGCAATGTTTTTTAA 150310 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 128 AGAAATTGGTCTTTCATGATATCCATTATAAATTCTGTATGAGATTGCAATATTTTTTAA 69 Query 150311 TTCCTCACGTCTCATTTTTTGCATTGTTTCACGTGTGTACTCCATTTATTATATATTTGT 150370 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct 68 TTCCTCACGTCTCATTTTTTGCATTGTTTCACGTGTGTACGTCATTTATTATATATTTAT 9 Query 150371 TATTAA 150376 |||||| Sbjct 8 TATTAA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679308048741840