Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq7865 91.5 1e-13 seq1300 86.0 5e-12 >seq7865 Length=4356 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/237 (69%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 18089 TTTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTT 18148 |||| ||| ||| || || || | || |||| |||||| || || || || || ||||| Sbjct 3357 TTTTAGTT-TCCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTT 3415 Query 18149 GTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTG 18208 |||||| || || || |||||||| || ||||| ||| |||| | || || || Sbjct 3416 GTAGTCACTCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTG 3475 Query 18209 ATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACC 18268 |||| ||| | ||| || || || || | ||| || | | ||| | |||| Sbjct 3476 ATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATCGAATCACT 3535 Query 18269 GGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | |||| |||| ||||||| |||| ||||| | ||||| ||||| || ||||| Sbjct 3536 TGCCTCGACCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 >seq1300 Length=83366 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| || || | || |||| |||||| || || || || || ||||||||||||| | Sbjct 7890 CCTCCACGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 7831 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||||| || || || || |||| || | ||||||||| ||| Sbjct 7830 AGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGG 7771 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | || ||||| || |||| ||| || | | ||| ||||| | ||| | Sbjct 7770 ATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATGCCTCTACT 7711 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || | ||||||| | || || |||| || |||||||| || ||||| || Sbjct 7710 TCCAAGGTGATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTGCATATT 7661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379068514104315