Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq117 646 0.0 seq99 113 4e-20 >seq117 Length=549210 Score = 646 bits (716), Expect = 0.0 Identities = 1214/1778 (68%), Gaps = 43/1778 (2%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 ||||||||| || |||| || ||| | ||||| | || ||||| || || |||||||| Sbjct 312223 CTTGTCCACCGTGAACTTGATCGCGCTCGCGGCGGCCTTTGTGCGCAGGTAGTACATGCC 312282 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||||| ||| ||||||||||||| || || || || | || | ||| |||| Sbjct 312283 GGTCTTCACGCCCTTCTTCCACGCGTAGAAGTGCATGCTGGTAAGCTTGGCGTAATTCGG 312342 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | | | | || | ||| | ||||||||||| ||||| || || || |||||||| || Sbjct 312343 CTCGGCGAGGTGAATATTCAGTGACTGACTCTGGTCGATGAAGGCGCCGCGATCGGCAGC 312402 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| || || | || | ||| || ||||| ||||||||||| || ||| | | || Sbjct 312403 CATGTTGATTATCGTCTTCTGCGAGATCTCCCAGACGGTCTTGTAGAGCTGCTTCAGGTC 312462 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404 ||| ||| |||| |||| ||||| ||||| | | ||||| || || || Sbjct 312463 GTCCGGGATCTCCTCGACGTTCTGAACGGAGCCGTTCTCGGCGATGATGCGGTTCTTCAT 312522 Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 |||| ||||| ||| |||| | || || | ||| || |||| || | || Sbjct 312523 GTGGTCGTCCCACAGGCCGCACTCGGTGAGGTCCTTCAGCAGGTGGTGGTTGACGATCTG 312582 Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 ||||||||||| | ||||| || ||| |||||| ||| ||| |||| || || Sbjct 312583 GAACTCGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCTCGTGTACGCCTCGATCGACTC 312642 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 |||||| || || ||||| || ||||| ||||||||||||||||| | ||| || ||| Sbjct 312643 ATTGTTGCCGAGGATCTGTGCCGTCGACGCGGTCGGCATCGGCGCGAGCAGCAGGCTGTT 312702 Query 22585 TCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGG 22644 | | |||||| | || || ||||||| ||||||||| || |||| || Sbjct 312703 GCGGACGCCGTGAGCGGCGATCTTCGCCTTGAGCGCGCTCCAGTCCCAGAGGTCGGTGGG 312762 Query 22645 CGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTA 22704 ||||| | ||||||| ||||| |||| ||||| || | |||| ||| |||| Sbjct 312763 GGTCAC---GCCCCACATGTCGTACTGCAGGACGCCCTTGCTGACGGGGCAGCCGGCGTA 312819 Query 22705 CGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATA 22764 ||| ||||| || ||| || | || || |||||||||||||||| ||||||||| || Sbjct 312820 CGTCTCGTAGGGGCCAAGCTTCTCCGCGAGCTCGCAGCTCGCCTCCAGCGCGCCGTAGTA 312879 Query 22765 TATAGTCTCGAAGATTTTCTTGTTCAATTCGGC--GGCGGCGACGCTTTCGTACGGCATA 22822 ||| | |||||| || | |||||| | | || ||| |||| ||| |||||| Sbjct 312880 TATCGACTCGAATATCTGCTTGTTGA--GCAGCTGGGCTTGCTCGCTCTCGAACGGCAAG 312937 Query 22823 CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTC 22882 ||||| | | ||||||||| || | |||||||||||| || |||||||| |||| | Sbjct 312938 CGCATGAGGATGAACGCGTCGGCGAGACCCTGAACGCCGATGCCGATCGGACGGTGGCGC 312997 Query 22883 AGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAG 22942 | ||||| ||||| | || || | || ||||| | |||| | | Sbjct 312998 ATGTTCGATCGGCGCGCCTCCTCAACCGGGTAGAAGTTGATGTCGATGATCTTGTTGAGG 313057 Query 22943 TTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTGT 23002 || | || | | ||||| | ||||||| ||| | |||| Sbjct 313058 TTGCGCGTGATGACCTTCGTCACGTCCTTCAGCTTGCGGAAGTCGT--ACGTC---TTGT 313112 Query 23003 AC-----AACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTT 23057 | || || |||||| |||| |||||| || ||||| |||||| ||| || Sbjct 313113 CCGCGCGCACGTACATGTTGAGCGCGACCGAGGCGAGGTTGCAGACGGCCGTCTCATCGG 313172 Query 23058 TGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGC 23117 |||| |||||| || ||||| || || || ||||| ||||| || ||||| | || Sbjct 313173 GCGACGAGTACTCGACGATTTCCGTGCACAGGTTGCTGCACTTAATGGTGCCGAGGTTCT 313232 Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177 |||||| || |||||||||| ||||||||||||||||| || || ||||| || Sbjct 313233 GCTGGTTCGACTTGCGATTGCACGCGTCCTTGTAGAGCATGTAGGGAGTTCCCGTTTCCG 313292 Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGC-GTGAAC--ACGTCGCACGTACC 23234 |||||| || ||||| || ||||| ||| || ||| | | || ||| | Sbjct 313293 TCTGCGATTCCATGATGGCGTACCACAGCTGCTGTGCTTTGATCGTCCTTCTCACTT--- 313349 Query 23235 TGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCA 23294 |||| | | |||||||| ||| | || || |||||| | || | |||||||||| Sbjct 313350 TGCCCTGCTTTTCGTACTTGGTGTAGAGAGCTTCGAATTCGTCGCCCCAGCAGTCGGCCA 313409 Query 23295 GGCCGGGCGATTGCATCGGACACATGAG-----ACTCCACATTGAGTCATTTTCAACGCG 23349 ||| || ||| | |||||||||||| | ||| |||||| ||| || | Sbjct 313410 AGCCCGGGCATTCCGCCGGACACATGAGAGACCAGTCCTGATTGAG-----TTCGACCCT 313464 Query 23350 TCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTC 23409 |||| || |||||||| ||||| || |||||||||| || | || ||| ||||| Sbjct 313465 CGTCATGAACAGATCCGGGATCCAGAGCCCGTAGAACAGGTCTCTCGCTCGCTGTTCCTC 313524 Query 23410 TTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAG 23469 || ||||||||||| || | || | ||| || || | |||||| |||||||||||||| Sbjct 313525 CTTCCCGGTGTTCTTCTTGCAGTCGAGAAACTCGAAGATGTCCGCGTGCCACGGCTCGAG 313584 Query 23470 GTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTT 23529 ||| | ||||| |||||||| | ||| ||||||||||| |||||||| | |||||||| Sbjct 313585 GTACATCGCAAAGGCGCCCGGACGCTTGTTGCCGCCCTGGTCGACGTACCTCGCCGTGTT 313644 Query 23530 GTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACT 23589 ||| | |||| ||||| || | ||| ||||| || |||| ||| || | Sbjct 313645 ATTGAAGACTCGCAGCATGGGAAGGAGGCCGTTCGAGCAGCCGTTGGTGCCGGCGA---- 313700 Query 23590 CGAACCTT----TTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCG 23645 | | ||| || || | |||||| | || || || |||||||| | || |||| Sbjct 313701 TGTAGCTTCCCGAGGCGCGGATGTTGTGTATGTTGACGCCGATGCCTCCTGCGGACTTCG 313760 Query 23646 ATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCG 23705 |||| | |||||||| ||||| |||||||||||||||||||||||||| || || ||| Sbjct 313761 ATATGAGCGCGCATTCCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATCG 313820 Query 23706 CGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGC 23765 | || ||| || || | |||| ||||| |||| ||| || ||||| Sbjct 313821 TCAGCAGGAAGCAGCTGGAGAGCTGCGGACGCGGCGTGCCGGCGTTGAAGAGCGTCGGCG 313880 Query 23766 TGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGT 23825 |||||||| || | | ||||| || |||||||| ||||||||| || |||| Sbjct 313881 ACGCGTGCGTGAACCACTTCTCCGACAGCAGGTTGTACGTCTCGATGGCGCTGTCGATGT 313940 Query 23826 -CCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862 ||||| ||| || |||| || || | ||| | ||| Sbjct 313941 CCCTCT-GGTGGATCCCGACGGACACCCTCATGAGCAT 313977 >seq99 Length=602874 Score = 113 bits (124), Expect = 4e-20 Identities = 153/209 (73%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 57534 CGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCA 57593 ||||| ||||| | || || || | |||| ||||| ||| | |||||||| || ||| Sbjct 458992 CGTAGGTTTGTACTTTTCCCCATCAAGTATCATGACATCTGGCAAATGTACAAGAAAGCA 458933 Query 57594 GAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGAT 57653 || ||||| |||||||| || ||||| |||||||| || ||| ||| |||||||| Sbjct 458932 GAGGCATCCTTTTGGACAGTGGAAGAGGTAGACCTCAGCAAAGATTTGACTGATTGGGAC 458873 Query 57654 TCCCTCAAAGAATCTGAG-AGAAAT--TTTATTAAACACGTGTTGGCGTTTTTCGCCGCA 57710 || || || | ||| || || || || ||||||||||||||||||||| ||| Sbjct 458872 AAACTGAA-GA--CCGAGGAGCAACACTTCATATCACACGTGTTGGCGTTTTTCGCTGCA 458816 Query 57711 TCCGATGGTATTGTTAACGAGAATTTGGT 57739 ||||| ||||| || || ||| |||| Sbjct 458815 AGTGATGGAATTGTGAATGAAAATCTGGT 458787 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158 |||| || || || |||||||||||||| ||||| |||| | || || || | |||| Sbjct 457566 AGGGGCTACACACCGATTTTGCGTGCCTGTTGTACAGTCACCTAGTGAACAAGCTCACGC 457507 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 | || |||| || || ||| | || || ||| |||||| | ||||| | || | Sbjct 457506 AGTCCCGAATCTATGAGATCATCGCTGACGCTGTCAGGATCGAGCAGGAGTTCCTAACGG 457447 Query 58219 AAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 || || || || | | |||| |||||| | | | ||||| |||||||||||| Sbjct 457446 TGGCACTTCCCGTCTCACTCATCGGGATGAACTGTAAACTTATGTCCCAGTACATTGAGT 457387 Query 58279 TTGTTGCCGAC 58289 | ||||||||| Sbjct 457386 TCGTTGCCGAC 457376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445434376469040