Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq117 248 1e-60 seq99 165 1e-35 >seq117 Length=549210 Score = 248 bits (274), Expect = 1e-60 Identities = 1124/1770 (64%), Gaps = 18/1770 (1%) Strand=Plus/Plus Query 62036 CTTGTCCAATGTGAA-TTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62094 |||||||| ||||| |||| | | || |||| || || || || |||||||| | Sbjct 312223 CTTGTCCACCGTGAACTTGATCGCGCTCGCG-GCGGCCTTTGTGCGCAGGTAGTACATGC 312281 Query 62095 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62154 | || || | || |||| |||| || ||||| || || || |||| ||| ||| Sbjct 312282 CGGTCTTCACGCCCTTCTTCCACGCGTAGAAGTGCATGCTGGTAAGCTTGGCGTAATTCG 312341 Query 62155 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62214 | || || | || ||||||| || ||||| || ||||||||||| || | || |||| Sbjct 312342 GCTCGGCGAGGTGAATATTCAGTGACTGACTCTGGTCGATGAAGGCGCCGCGATCGGCAG 312401 Query 62215 CCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62274 |||| || || |||||||| || | || ||||| | || || || | |||| | | Sbjct 312402 CCATGTTGATTATCGTCTTCTGCGAGATCTCCCAGACGGTCTTGTAGAGCTGCTTCAGGT 312461 Query 62275 CTTCTGGAAGGTT-TGTA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331 | || || | | | | ||||||| ||| || || | || || | ||||| | Sbjct 312462 CGTCCGGGATCTCCTCGACGTTCTGAACGGAGCCGTTCTCGGCGATGATGCGGTTCTTCA 312521 Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTT 62391 | | || | ||| | | |||||| | | | || || || |||| || | | Sbjct 312522 TGTGGTCGTCCCACAGGCCGCACTCGGTGAGGTCCTTCAGCAGGTGGTGGTTGACGATCT 312581 Query 62392 GGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62451 |||| || || || | || | ||| | ||| || || || || |||| || | ||||| Sbjct 312582 GGAACTCGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCTCGTGTACGCCTCGATCGACT 312641 Query 62452 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62511 |||| || || | || || || || || || |||||||| || || | || | || | Sbjct 312642 CATTGTTGCCGAGGATCTGTGCCGTCGACGCGGTCGGCATCGGCGCGAGCAGCAGGCTGT 312701 Query 62512 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACG 62571 | | | |||| | ||| || | || || ||| | ||| || || | | Sbjct 312702 TGCGGACGCCGTGAGCGGCGATCTTCGCCTTGAGCGCGCTCCAGTCCCAGAGGTCGGTGG 312761 Query 62572 GTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 62631 | || || || || | || || ||| || | || | || | Sbjct 312762 GGGTCACGCCCCACATGTCGTACTGCAGGACGCCCTTGCTGACGGGGCAGCCGGCGTACG 312821 Query 62632 TATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAA 62691 | || || || || |||||| || || | || |||||||| | || ||||| || | Sbjct 312822 TCTCGTAGGGGCCAAGCTTCTCCGCGAGCTCGCAGCTCGCCTCCAGCGCGCCGTAGTATA 312881 Query 62692 TGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTA 62751 | | || || |||| ||| || || || |||| | ||| || || || | | Sbjct 312882 TCGACTCGAATATCTGCTTGTTGAGCAGCTGGGCTTGCTCGCTCTCGAACGGCAAGCGCA 312941 Query 62752 AGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62811 ||| || |||||||| || | || ||||| || || ||||| || | || | | | | Sbjct 312942 TGAGGATGAACGCGTCGGCGAGACCCTGAACGCCGATGCCGATCGGACGGTGGCGCATGT 313001 Query 62812 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62871 | || || || || || || | || || || || || || ||||| || | Sbjct 313002 TCGATCGGCGCGCCTCCTCAACCGGGTAGAAGTTGATGTCGATGATCTTGTTGAGGTTGC 313061 Query 62872 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC----CATCTATT 62927 || || || ||| |||||||| ||| | || || | || | | | Sbjct 313062 GCGTGATGACCTTCGTCACGTCCTTCAGCTTGCGGAAGTCGTA-CGTCTTGTCCGCGCGC 313120 Query 62928 ACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCA 62987 || ||||||| | || || || || || || || ||||| ||||| | || Sbjct 313121 ACGTACATGTTGAGCGCGACCGAGGCGAGGTTGCAGACGGCCGTCTCATCGGGCGACGAG 313180 Query 62988 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTA 63047 || | | || || ||||| || || || ||||| || || || | || || || || Sbjct 313181 TACTCGACGATTTCCGTGCACAGGTTGCTGCACTTAATGGTGCCGAGGTTCTGCTGGTTC 313240 Query 63048 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 63107 ||| || ||||| ||||| || || ||| | ||||| || ||||| |||| ||| Sbjct 313241 GACTTGCGATTGCACGCGTCCTTGTAGAGCATGTAGGGAGTTCCCGTTTCCGTCTGCGAT 313300 Query 63108 TCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATCT-CCTTTCTC 63165 || || || || | ||| | | || | || || || | | | | | || | || Sbjct 313301 TCCATGATGGCGTACCACAGCTGCT-GTGCTTTGATCGTCCTTCTCACTTTGCCCTGCT- 313358 Query 63166 TTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGAC 63225 ||||||| || || | |||||| ||||| ||||| | | |||| | || | Sbjct 313359 TTTCGTACTTGGTGTAGAGAGCTTCGAATTCGTCGCCCCAGCAGTCGGCCAAGCCCGGGC 313418 Query 63226 ATTCATCCGGACACATCAACGACCACTC-TCCGTCA-TCCTTCACTCGTTTCATAAAGAG 63283 |||| |||||||||| | ||||| || | | | | | | ||||| ||| || || Sbjct 313419 ATTCCGCCGGACACATGAGAGACCAGTCCTGATTGAGTTCGACCCTCGT--CATGAACAG 313476 Query 63284 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATT 63343 ||| || ||||| || | || || ||||| | || |||||||| || || || || Sbjct 313477 ATCCGGGATCCAGAGCCCGTAGAACAGGTCTCTCGCTCGCTGTTCCTCCTTCCCGGTGTT 313536 Query 63344 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63403 ||| || ||||| ||| | | || || | |||||||| || | ||| || || | Sbjct 313537 CTTCTTGCAGTCGAGAAACTCGAAGATGTCCGCGTGCCACGGCTCGAGGTACATCGCAAA 313596 Query 63404 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63463 | || || || ||||| || ||||| || | ||| || || |||||||| | |||| Sbjct 313597 GGCGCCCGGACGCTTGTTGCCGCCCTGGTCGACGTACCTCGCCGTGTTATTGAAGACTCG 313656 Query 63464 CAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGC 63523 || ||| |||| | ||||| || || ||||| |||| ||| |||| ||| ||| Sbjct 313657 CAGCATGGGAAGGAGGCCGTTCGAGCAGCCGTTGGTGCCGGCGATGTAGCTTCCCGAGGC 313716 Query 63524 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63583 || || || || | || || || ||||| || || || | |||||| Sbjct 313717 GCGGATGTTGTGTATGTTGACGCCGATGCCTCCTGCGGACTTCGATATGAGCGCGCATTC 313776 Query 63584 TTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63643 || | |||||| |||||||| || ||||| || || |||| | || || || ||||| Sbjct 313777 CTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATCGTCAGCAGGAAGCAGCT 313836 Query 63644 AGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 63703 || | || |||| | || || || || || | || || || |||||||| ||||| Sbjct 313837 GGAGAGCTGCGGACGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTGAACCA 313896 Query 63704 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63763 || || || || || ||||||||||| || || ||| || |||| || || || || Sbjct 313897 CTTCTCCGACAGCAGGTTGTACGTCTCGATGGCGCTGTCGATGTCCCTCTGGTGGATCCC 313956 Query 63764 TACTGCGACACGCATTAACATGTGCTGAGG 63793 || | || | ||| | ||| ||||| || Sbjct 313957 GACGGACACCCTCATGAGCATCTGCTGGGG 313986 >seq99 Length=602874 Score = 165 bits (182), Expect = 1e-35 Identities = 158/200 (79%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 33968 ATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 34027 |||||||||||| ||||||||||| || || ||||||||||| || ||| ||| || | Sbjct 458792 ATTTTCATTCACAATTCCATCACTTGCAGCGAAAAACGCCAACACGTGTGATATGAAGTG 458851 Query 34028 TTTTTCGTCTGGTGTT-AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTT 34086 || || || ||| || ||||| | ||||||| | | |||||| | || || |||| Sbjct 458852 TTGCTCCTC-GGTCTTCAGTTTGTCCCAATCAGTCAAATCTTTGCTGAGGTCTACCTCTT 458910 Query 34087 CCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGA 34146 ||||||||||||| ||||||||||| || || ||||| | ||||||||||||||| | || Sbjct 458911 CCACTGTCCAAAAGGATGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGATACTTGA 458970 Query 34147 TTGGGAAAATAACAAATCTA 34166 | ||||||| ||||| ||| Sbjct 458971 TGGGGAAAAGTACAAACCTA 458990 Score = 82.4 bits (90), Expect = 1e-10 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 33276 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 33335 ||||| || ||||| || ||||| || || || | || || ||||| || || |||||| Sbjct 457045 GACATCACACCCATCTTCTGGTACTCGCCAACCCTCTTCTCAAAAAAGTTGGTCTTTCCT 457104 Query 33336 TCCAATGATATATTTTCCATGAAATCAAACGGATT 33370 ||||| ||||| | ||||||||||| |||||||| Sbjct 457105 TCCAAGGATATGTGCTCCATGAAATCGAACGGATT 457139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629348488233360