Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq99 116 3e-21 >seq99 Length=602874 Score = 116 bits (128), Expect = 3e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 12016 ATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTA 12075 ||| ||||| ||||| |||||||| | || ||||| || | | ||| ||| |||| Sbjct 458792 ATTTTCATTCACAATTCCATCACTTGCAGCGAAAAACGCCAACACGTGTGATATGAAGTG 458851 Query 12076 TTTTTCGTCTTTAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTC 12135 || || || | | | ||| ||||||||| |||||||| | ||||| ||||| Sbjct 458852 TTGCTCCTCGGTCTTCAGTTTGTCCCAATCAGTCAAATCTTTGCTGAGGTCTACCTCTTC 458911 Query 12136 AACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAAT 12195 || |||||||| |||| ||| || || ||||||| |||||| ||||||||||| || Sbjct 458912 CACTGTCCAAAAGGATGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGATACTTGAT 458971 Query 12196 AGGGAAAATAACGAACCTA 12214 ||||||| || |||||| Sbjct 458972 GGGGAAAAGTACAAACCTA 458990 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || |||||||| || || ||||| || || | || |||||||| || |||||||| Sbjct 457839 TCATCTCTACTGATGAGCTCATTGCTGAAGGTCAGACCAGGCATCAAGCCACGTTTTTTC 457898 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| ||||||||||||||||| || || ||||| |||||||| ||||| | || || Sbjct 457899 AGCCAGAATATAGCAGCAAATGACCCTGAGAAGAAGATTCCCTCGACAGCCGAGAAAGCC 457958 Query 11774 ACTACTCTTTCTCCATAT 11791 || | || || ||||| Sbjct 457959 ACCAGTCGCTCAGCATAT 457976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468175825159280