Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq99 104 2e-17 >seq99 Length=602874 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14109 |||||||| ||||| |||||||| || || ||||| ||||| | || | || |||| | Sbjct 458793 TTTTCATTCACAATTCCATCACTTGCAGCGAAAAACGCCAACACGTGTGATATGAAGTGT 458852 Query 14110 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCA 14169 ||||| || | || ||||| | |||||| | ||||| || || ||||| || || Sbjct 458853 TGCTCCTCGGTCTTCAGTTTGTCCCAATCAGTCAAATCTTTGCTGAGGTCTACCTCTTCC 458912 Query 14170 ACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATA 14229 ||||||||||| || | ||||| || |||||| ||| || || | ||| || Sbjct 458913 ACTGTCCAAAAGGATGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGATACTTGATG 458972 Query 14230 GGAAAAACTACAAATCT 14246 || |||| |||||| || Sbjct 458973 GGGAAAAGTACAAACCT 458989 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||||||||| || || || || || || | || |||||||| || ||||||| Sbjct 457837 CCTCATCTCTACTGATGAGCTCATTGCTGAAGGTCAGACCAGGCATCAAGCCACGTTTTT 457896 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | ||| ||||| ||||| ||||| || || ||||| |||||||| || || | || | Sbjct 457897 TCAGCCAGAATATAGCAGCAAATGACCCTGAGAAGAAGATTCCCTCGACAGCCGAGAAAG 457956 Query 13802 CTATTAGTCGTTC 13814 | | ||||| || Sbjct 457957 CCACCAGTCGCTC 457969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478232329114680