Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq117 260 2e-64 seq99 132 6e-26 >seq117 Length=549210 Score = 260 bits (288), Expect = 2e-64 Identities = 1109/1744 (64%), Gaps = 28/1744 (2%) Strand=Plus/Plus Query 70822 GCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAA 70881 ||||| || || || || ||||||||||| || || | || |||| |||| || Sbjct 312254 GCGGCCTTTGTGCGCAGGTAGTACATGCCGGTCTTCACGCCCTTCTTCCACGCGTAGAAG 312313 Query 70882 TGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTT 70941 ||||| || || || |||| || | || ||||| | ||||||||||| |||||||| Sbjct 312314 TGCATGCTGGTAAGCTTGGCGTAATTCGGCTCGGCGAGGTGAATATTCAGTGACTGACTC 312373 Query 70942 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 71001 || ||||||||||| || | || |||||||| || || |||||||| || | || ||| Sbjct 312374 TGGTCGATGAAGGCGCCGCGATCGGCAGCCATGTTGATTATCGTCTTCTGCGAGATCTCC 312433 Query 71002 CAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT-TGTA--TTCTGAATGGAT 71058 || | || || || | |||| | || || || | | | | ||||||| ||| Sbjct 312434 CAGACGGTCTTGTAGAGCTGCTTCAGGTCGTCCGGGATCTCCTCGACGTTCTGAACGGAG 312493 Query 71059 CCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAA 71118 || || || || || | || || || | || | ||| | | |||||| | Sbjct 312494 CCGTTCTCGGCGATGATGCGGTTCTTCATGTGGTCGTCCCACAGGCCGCACTCGGTGAGG 312553 Query 71119 ACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAA 71178 | | || || || | || || | || || || || || | || | || | ||| Sbjct 312554 TCCTTCAGCAGGTGGTGGTTGACGATCTGGAACTCGCCGGAGAGCACGCGCCGCGAGTAG 312613 Query 71179 ATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 71238 || || || || |||| || | |||||||| || || | || || || || || || Sbjct 312614 ATGTTGCTCGTGTACGCCTCGATCGACTCATTGTTGCCGAGGATCTGTGCCGTCGACGCG 312673 Query 71239 GTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGG--ATTTTATCTT 71296 |||||||| || || | || || || || | | || |||| ||| || || | | Sbjct 312674 GTCGGCATCGGCGCGAGCAGCAGGCTGTTGCGGACGCC--GTGAGCGGCGATCTTCGCCT 312731 Query 71297 TTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNA 71356 | || | ||| | ||| || || | || || | Sbjct 312732 TGAGCGCGCTCCAGTCCCAGAGGTCGGTGGGGGTCACGCCCCACATGTCGTACTGCAGGA 312791 Query 71357 TGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTT 71416 ||| || || || | || || || || ||||| || || || || || || | Sbjct 312792 CGCCCTTGCTGACGGGGCAGCCGGCGTACGTCTCGTAGGGGCCAAGCTTCTCCGCGAGCT 312851 Query 71417 CACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 71476 | || |||||||| | || || || || || | ||||| |||| ||| ||||| | Sbjct 312852 CGCAGCTCGCCTCCAGCGCGCCGTAGTATATCGACTCGAATATCTGCTTGTTGAGCAGCT 312911 Query 71477 GTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 71536 | |||| | ||| || || || | | ||| || |||||||| || | || |||| Sbjct 312912 GGGCTTGCTCGCTCTCGAACGGCAAGCGCATGAGGATGAACGCGTCGGCGAGACCCTGAA 312971 Query 71537 CGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 71596 |||| || ||||| || | ||| | | | || || || || || || || Sbjct 312972 CGCCGATGCCGATCGGACGGTGGCGCATGTTCGATCGGCGCGCCTCCTCAACCGGGTAGA 313031 Query 71597 AATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTT 71656 | || || || || || || ||||| || | || || || ||| ||||| || | Sbjct 313032 AGTTGATGTCGATGATCTTGTTGAGGTTGCGCGTGATGACCTTCGTCACGTCCTTCAGCT 313091 Query 71657 TGAGAAAATCAAATCTCCCATCTATT---ACAAACACGTTCAAGGCAACAGATGCCAGAT 71713 || | || || | || || || ||| ||| | || || || || || | Sbjct 313092 TGCGGAAGTCGTACGTCTTGTCCGCGCGCACGTACATGTTGAGCGCGACCGAGGCGAGGT 313151 Query 71714 TACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTAC 71773 | || ||||| ||||| | | || | | ||||| ||||| || || || | Sbjct 313152 TGCAGACGGCCGTCTCATCGGGCGACGAGTACTCGACGATTTCCGTGCACAGGTTGCTGC 313211 Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833 |||| ||||| || | || || || || ||| || ||||| ||||| || || | Sbjct 313212 ACTTAATGGTGCCGAGGTTCTGCTGGTTCGACTTGCGATTGCACGCGTCCTTGTAGAGCA 313271 Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCC 71892 | | ||||| || ||||| |||| ||||| || || || | ||| | | || | || Sbjct 313272 TGTAGGGAGTTCCCGTTTCCGTCTGCGATTCCATGATGGCGTACCACAGCTGCT-GTGCT 313330 Query 71893 TTTATTATATTCTTGTATCTCTTTTCTCT----TTCGTATTGTGTATATAATCGTTCGAA 71948 || || | | | || |||| | || |||||| | || || | |||||| Sbjct 313331 TTGATCGTCCT----TCTCACTTTGCCCTGCTTTTCGTACTTGGTGTAGAGAGCTTCGAA 313386 Query 71949 CTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACT 72007 ||||| ||||| ||| | | | || || || ||||| ||||||||| | ||||| | Sbjct 313387 TTCGTCGCCCCA-GCAGTCGGCCAAGCCCGGGCATTCCGCCGGACACATGAGAGACCAGT 313445 Query 72008 CTCCATCATCATTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 72065 | || | | || || | |||| || ||||| || ||||| || | || || Sbjct 313446 CCTGAT--TGAGTTCGACCCTCGTCATGAACAGATCCGGGATCCAGAGCCCGTAGAACAG 313503 Query 72066 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 72125 ||||| | || || ||||| || || || ||||| || ||||| ||| | | || Sbjct 313504 GTCTCTCGCTCGCTGTTCCTCCTTCCCGGTGTTCTTCTTGCAGTCGAGAAACTCGAAGAT 313563 Query 72126 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTG 72185 || | |||||||| || | ||| || || | | ||||| || ||||| || ||||| Sbjct 313564 GTCCGCGTGCCACGGCTCGAGGTACATCGCAAAGGCGCCCGGACGCTTGTTGCCGCCCTG 313623 Query 72186 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 72245 || | ||| || || |||||||| | |||| || ||| |||| | || || || || Sbjct 313624 GTCGACGTACCTCGCCGTGTTATTGAAGACTCGCAGCATGGGAAGGAGGCCGTTCGA-GC 313682 Query 72246 A-CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTA 72304 | || ||||| |||| ||| |||||||| ||| || || ||| || | || | Sbjct 313683 AGCCGTTGGTGCCGGCGATGTAGCTTCCCGAGGCGCGGATGTTGTGTATGTTGACGCCGA 313742 Query 72305 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 72364 | || ||||| || || || | |||||| || | ||| || ||||||||||| | Sbjct 313743 TGCCTCCTGCGGACTTCGATATGAGCGCGCATTCCTTCAGCGTGTCGTAGATGCCCTCGA 313802 Query 72365 TACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 72424 | || || ||| |||| | || || || ||||| || | || |||| || || | Sbjct 313803 TGCTGTCGTCCTTCATCGTCAGCAGGAAGCAGCTGGAGAGCTGCGGACGCGGCGTGCCGG 313862 Query 72425 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT 72484 | || || | || || || |||||||| ||||| || || ||||| || |||||||||| Sbjct 313863 CGTTGAAGAGCGTCGGCGACGCGTGCGTGAACCACTTCTCCGACAGCAGGTTGTACGTCT 313922 Query 72485 CAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCT 72544 | || || || || |||| || || || || || | || | ||| | ||| |||| Sbjct 313923 CGATGGCGCTGTCGATGTCCCTCTGGTGGATCCCGACGGACACCCTCATGAGCATCTGCT 313982 Query 72545 GAGG 72548 | || Sbjct 313983 GGGG 313986 >seq99 Length=602874 Score = 132 bits (146), Expect = 6e-26 Identities = 151/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 42451 ATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 42510 |||||| ||||| ||||| ||||| || || ||||||||||| || ||| ||| || | Sbjct 458792 ATTTTCATTCACAATTCCATCACTTGCAGCGAAAAACGCCAACACGTGTGATATGAAGTG 458851 Query 42511 TTTTTCGTCCGGTGTT-AATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTT 42569 || || | |||| || | ||| | ||||||| | | |||||| | ||||| |||| Sbjct 458852 TTGCTCCT-CGGTCTTCAGTTTGTCCCAATCAGTCAAATCTTTGCTGAGGTCTACCTCTT 458910 Query 42570 CTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAA 42629 | || |||||||| ||||| ||||| || || ||||| | |||||| |||||||| | | Sbjct 458911 CCACTGTCCAAAAGGATGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGATACTTGA 458970 Query 42630 TTGGGAAAATAACAAATCTA 42649 | ||||||| ||||| ||| Sbjct 458971 TGGGGAAAAGTACAAACCTA 458990 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 ||||||||||||| || | || ||| || || || || ||||| | |||||| |||| Sbjct 457837 CCTCATCTCTACTGATGAGCTCATTGCTGAAGGTCAGACCAGGCATCAAGCCACGTTTTT 457896 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||||| |||||||| || || ||||||||||| || || |||| || | Sbjct 457897 TCAGCCAGAATATAGCAGCAAATGACCCTGAGAAGAAGATTCCCTCGACAGCCGAGAAAG 457956 Query 42207 CAATAAGTCTCTCTCCATA 42225 | | |||| ||| |||| Sbjct 457957 CCACCAGTCGCTCAGCATA 457975 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 41759 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCT 41818 ||||| || ||||| || ||||| || || || | || || ||||| || ||||||||| Sbjct 457045 GACATCACACCCATCTTCTGGTACTCGCCAACCCTCTTCTCAAAAAAGTTGGTCTTTCCT 457104 Query 41819 TCCAATGATATATTTTCCATGAAATCAAACGGATT 41853 ||||| ||||| | ||||||||||| |||||||| Sbjct 457105 TCCAAGGATATGTGCTCCATGAAATCGAACGGATT 457139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670639310356120