Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq14155 102 3e-17 >seq14155 Length=967 Score = 102 bits (112), Expect = 3e-17 Identities = 91/112 (81%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 50220 TTGTGGGTGGCTGATTTTACCTGGGTAAGCACATGGCAG--GGCTTCGTTTATGTGGCGT 50277 |||||||| ||||| ||||||| || || || || | |||||||| |||||||||| Sbjct 858 TTGTGGGTTGCTGACTTTACCTACGTCAGAACC--GCCGTTGGCTTCGTCTATGTGGCGT 801 Query 50278 TCATCATTGATGTGTTCGCCGGATACATCGTGGGATGGCAGGTCTCATCATC 50329 ||||||||||||| ||||| | |||||||| || ||| ||||||| ||||| Sbjct 800 TCATCATTGATGTCTTCGCGCGCTACATCGTTGGCTGGAAGGTCTCTTCATC 749 Score = 96.9 bits (106), Expect = 1e-15 Identities = 89/111 (80%), Gaps = 4/111 (4%) Strand=Plus/Minus Query 53061 TGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCAG--GGCTTCGTCTATGTGGCGTT 53118 ||||||| ||||| ||||| |||||||| || || | |||||||||||||||||||| Sbjct 857 TGTGGGTTGCTGACTTTACCTACGTCAGAACC--GCCGTTGGCTTCGTCTATGTGGCGTT 800 Query 53119 CATCATTGATGTGTTTGCCGGATACATTGTGGGGTGGCGGGTCTCATCGTC 53169 |||||||||||| || || | ||||| || || ||| |||||| || || Sbjct 799 CATCATTGATGTCTTCGCGCGCTACATCGTTGGCTGGAAGGTCTCTTCATC 749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185123314797048