Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq14089 143 7e-30 seq12792 109 1e-19 seq12230 105 2e-18 >seq14089 Length=980 Score = 143 bits (158), Expect = 7e-30 Identities = 342/517 (66%), Gaps = 0/517 (0%) Strand=Plus/Plus Query 32879 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTTTCCGAT 32938 || ||||||||| ||| ||| || | ||||||||| ||| || |||||||| | Sbjct 275 TGTAGTGGTCAAGTAAATTTGGTCAGAGTTTTAGAGTTTACCCAATACCGATTTTCTGCA 334 Query 32939 TCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATCCAACG 32998 |||||||| | ||||||| | |||| ||| ||||| | |||||||| |||| | Sbjct 335 TCGTTTGGAGATAACCCATCATTATGACGGTGTGGTCTAACCTGGCTGTAATAGCCAATG 394 Query 32999 ATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCGGCATC 33058 || |||||| | | || ||| || | || | |||| || | || | | Sbjct 395 ATGTAGTCCAGCACTGTCTGCTTTGCTTCAATAAATGATTGAAAACCTACTTCAGGTACC 454 Query 33059 CATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCG 33118 ||||| | || | |||||| || || || ||||| || || ||||| || || || Sbjct 455 CATTCACTTTTTAAACTCCTAAAAAATCGCTCCATCGGTGCATTGTCCCAACAATTACCT 514 Query 33119 CGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTC 33178 || || ||||| || ||| | ||||| || ||||| | | || | ||| | | | || Sbjct 515 CGACGACTCATGCTTTGTTTTATCTGATAACGCCAAAGCAGTTGTCTGAAATACGTACTG 574 Query 33179 GTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCACGGGTTTCC 33238 ||||| |||| || ||||| || ||||| || | | || ||||| | || Sbjct 575 GTATAGTGACACCCTTGATCAGAATGAAACATGACACGACTCGGTTTACCTCTTCGCTCA 634 Query 33239 CATGCCATTTCCAGCGCTTTCATGGTGAGCCTGCTGTCCGGCGAGAACGACATGGCCCAG 33298 | ||||| ||| |||| ||| || || ||||| || ||||| ||||| Sbjct 635 TAAGCCATGCTCAGTGCTTGGCCGGTTAGTTGTGAGTTAGGCGATAATGACATCGCCCAA 694 Query 33299 CCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGCTTACCC 33358 || || || ||||| || | | || | ||| || || | || ||||| || ||| Sbjct 695 CCAACAGGCTTTCTGGCATATAAATCCATAACTACTGCCAAATAAGCCCAACGACGCCCC 754 Query 33359 GTCCAGATATAGGTCACATCACCGCACCACACCTGAT 33395 | ||| ||||| || |||||||||||||| |||| || Sbjct 755 GACCAAATATACGTTACATCACCGCACCAGACCTCAT 791 >seq12792 Length=1384 Score = 109 bits (120), Expect = 1e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33053 GGCATCCATTC-GTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCA 33111 ||||||||||| ||| | || || ||||| || || |||||||| |||||||||||| Sbjct 1080 GGCATCCATTCTGTTTTATAG-CTTCTGAAAAAACGCTCCATTGGCGCGTTATCCCAGCA 1022 Query 33112 GTTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCGGAACTG 33171 || || |||||||||||||| ||| | || || |||||||| | | || || | | Sbjct 1021 ATTGCCACGCCGGCTCATACTTTGTGTTATTTGATATCGCCATAGTCGTTGTCGATATTT 962 Query 33172 CCTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCACG 33231 | ||| || ||||||| |||||| || ||| ||||| || || || |||| || Sbjct 961 CAAGCTTGTGTAATGACAGCCCTGGTCAGAGTGAAACATGACGCCTTTCGGTCTACCGCG 902 Query 33232 GGTTTCCCATGCCATTTCCAGCGC 33255 | |||| | |||||| ||| || Sbjct 901 GCTTTCATAAGCCATTCGCAGTGC 878 >seq12230 Length=1820 Score = 105 bits (116), Expect = 2e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 33053 GGCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAG 33112 |||||||||||| | || | || || ||| | |||||||| || ||||||||||| Sbjct 630 GGCATCCATTCGGTTTTGAAGCTTCTAAAGCACCGTTCCATGGGAGCATTATCCCAGCAA 689 Query 33113 TTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCG--GAACT 33170 || || || ||||||||||||||| |||| | |||||||| ||| ||| | || Sbjct 690 TTACCACGGCGGCTCATACTCTGTTTGATTTTGTATCGCC---ATAGCTGTTGAATAAAG 746 Query 33171 GC-CTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCA 33229 || ||||||| ||||| | ||| ||||| |||||||| ||| || ||||| Sbjct 747 GCTTTGCTCGTGTAATGGCAGCCTTGATCCGAATGGAACATGACCTTTTGAGGTTTACCT 806 Query 33230 CGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGT 33264 | || ||| | || | || |||||||| ||||| Sbjct 807 CTGGCTTCATAAGCGACTTGTAGCGCTTTTATGGT 841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124727680744470