Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq33794 138 7e-28 seq16528 131 1e-25 seq38469 96.9 2e-15 >seq33794 Length=347 Score = 138 bits (152), Expect = 7e-28 Identities = 194/270 (72%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 72256 TGATTATGATCGACTACCTGCAACTTATGCGCGTCCCCGAGCTGCAA-GATAACCGAACG 72314 || |||| ||||| || ||||| ||||||| | || || ||| || ||||| | Sbjct 310 TGGTTATCATCGATTATCTGCAGCTTATGCA-GACCGGTAGTAGCACCGAAAACCGCGCC 252 Query 72315 CTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAAGTACCG 72374 |||||| |||| || || ||||| | || || |||| |||||| | | |||||| Sbjct 251 ACGGAAATATCCGAAATATCACGCTCGTTAAAAGCACTGGCAAAGGAACTCAACGTACCG 192 Query 72375 GTGGTGGCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGACCGGTA 72434 ||| | ||| |||| || || |||||| | ||||| || |||| ||||| ||||| Sbjct 191 GTGATTGCACTGTCGCAGCTCAATCGAAGTGTCGAACAACGACCGGATAAACGCCCGGTC 132 Query 72435 AATTCAGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTTTCTG 72494 | || || || |||||||| || | || ||||| ||||| ||| | || ||||| | Sbjct 131 ATGTCGGACTTGCGTGAATCGGGCGGTATCGAGCAAGACGCTGACGTCATCCTGTTTATC 72 Query 72495 TATCGCGACGAAGTTTATCACCCGGATAGC 72524 || ||||||||||||||| |||| || ||| Sbjct 71 TACCGCGACGAAGTTTATAACCCCGAAAGC 42 >seq16528 Length=721 Score = 131 bits (144), Expect = 1e-25 Identities = 220/317 (69%), Gaps = 6/317 (2%) Strand=Plus/Minus Query 72318 GAAATTGCCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAAGTACCGGTG 72377 ||||| | || ||||| ||||||||||| | ||||| || |||||| || || | Sbjct 704 GAAATCTCAGAAATTTCACGCTCACTGAAAGGCTTGGCAAAAGAATTAAGCGTCCCCATC 645 Query 72378 GTGGCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGACCGGTAAAT 72437 | || | ||||| || |||||| | || || ||| | | ||||| || | | Sbjct 644 ATTGCCCTTTCACAGCTCAATCGAAGTTTAGAGCAACGTCCCAATAAACGCCCTATTATG 585 Query 72438 TCAGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTTTCTGTAT 72497 || ||| |||||||||| || ||||| |||||||| || || | ||||| || | ||| Sbjct 584 TCTGATCTACGTGAATCTGGCGCAATCGAGCAGGATGCGGATATTATTATTTTCATCTAT 525 Query 72498 CGCGACGAAGTTTATCACCCGGA---TAGCGAAATGAAGGGCATTGCCGAGGTAATTATC 72554 ||||| ||||| ||| || || | ||| || || || || || || ||||| Sbjct 524 CGCGATGAAGTCTATAACGAAGACTCTCCCGA---CAAAGGTATGGCAGAAGTTATTATT 468 Query 72555 GGAAAGCAACGAAATGGCCCAATTGGCACGGTGAGATTGGCTTTTAACGGCCAATACTCA 72614 || || ||| |||| ||||| ||||| |||||| | | | |||| ||| ||||| | Sbjct 467 GGCAAACAAAGAAACGGCCCGATTGGTACGGTGCGGCTAACCTTTACCGGTAAATACACC 408 Query 72615 CGGTTTGATAACTATGC 72631 || || |||||||| || Sbjct 407 CGCTTCGATAACTACGC 391 >seq38469 Length=310 Score = 96.9 bits (106), Expect = 2e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 72327 GAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAAGTACCGGTGGTGGCATTG 72386 ||||| || || ||| ||||||| |||| || || || | |||||||| ||| || Sbjct 270 GAGATCTCCCGTTCATTGAAGGCTCTGGCCAAAGAGTTGAGCTTGCCGGTGGTTGCACTG 211 Query 72387 TCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTA 72446 ||||| || ||||| || || ||| || | |||||||| || | | || || | Sbjct 210 TCACAGCTAAATCGTTCTCTCGAAAGTCGCACCGACAAACGTCCCATGATGTCCGACCTG 151 Query 72447 CGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTTTCTGTATCGCGA 72502 || ||||| ||||| || ||||||||||| || | || |||||| ||||||| || Sbjct 150 CGAGAATCGGGAGCCATCGAGCAGGACGCCGATGTCATCATGTTTGTGTATCGGGA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303014985575427