Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1483 86.0 3e-12 seq341 86.0 3e-12 seq129 84.2 1e-11 seq2274 82.4 4e-11 seq540 82.4 4e-11 >seq1483 Length=70461 Score = 86.0 bits (94), Expect = 3e-12 Identities = 74/91 (81%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||||||| || |||||| | |||||||||| |||| ||||||||||||||||| Sbjct 26321 ATAAAAAAA-AATTTGGCCAGTACGGGGATCGAACCCGCGACATTCGCGTTATTAGCACG 26263 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||||||| |||| ||||||||| |||| || Sbjct 26262 ACGCTCTAACCAGCTGAGCTAACCGGCCATC 26232 >seq341 Length=315112 Score = 86.0 bits (94), Expect = 3e-12 Identities = 62/71 (87%), Gaps = 1/71 (1%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||| ||||||||| || Sbjct 33092 GGATCGAACCCGCGACATTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAACCGG 33033 Query 11528 CC-GTCGACGA 11537 || ||||| || Sbjct 33032 CCAGTCGATGA 33022 >seq129 Length=665484 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||| ||||||||| || Sbjct 130510 GGATCGAACCCGCGACATTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAACCGG 130569 Query 11528 CCG 11530 ||| Sbjct 130570 CCG 130572 >seq2274 Length=36202 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11469 GATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||||| |||| |||||||||||||||||||||||| |||| ||||||||| ||| Sbjct 3099 GATCGAACCCGCGACATTCGCGTTATTAGCACGACGCTCTAACCATCTGAGCTAACCGGC 3158 Query 11529 CG 11530 || Sbjct 3159 CG 3160 >seq540 Length=224505 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||| ||||||||| || Sbjct 81493 GGATCGAACCCGCGACATTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAACCGG 81434 Query 11528 CC 11529 || Sbjct 81433 CC 81432 Lambda K H 0.639 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261301300759612