Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq117 262 5e-65 seq99 163 4e-35 >seq117 Length=549210 Score = 262 bits (290), Expect = 5e-65 Identities = 1129/1772 (64%), Gaps = 22/1772 (1%) Strand=Plus/Plus Query 61985 CTTGTCCAATGTGAA-TTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62043 |||||||| ||||| |||| | | || |||| || || || || |||||||| | Sbjct 312223 CTTGTCCACCGTGAACTTGATCGCGCTCGCG-GCGGCCTTTGTGCGCAGGTAGTACATGC 312281 Query 62044 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62103 | || || | || |||| |||| || ||||| || || || |||| ||| ||| Sbjct 312282 CGGTCTTCACGCCCTTCTTCCACGCGTAGAAGTGCATGCTGGTAAGCTTGGCGTAATTCG 312341 Query 62104 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62163 | || || | || ||||||| || ||||| || ||||||||||| || | || |||| Sbjct 312342 GCTCGGCGAGGTGAATATTCAGTGACTGACTCTGGTCGATGAAGGCGCCGCGATCGGCAG 312401 Query 62164 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62223 |||| || || |||||||| || | || ||||| | || || || | |||| | | Sbjct 312402 CCATGTTGATTATCGTCTTCTGCGAGATCTCCCAGACGGTCTTGTAGAGCTGCTTCAGGT 312461 Query 62224 CTTCTGGAAGGTT-TGTA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280 | || || | | | | ||||||| ||| || || || || || | ||||| | Sbjct 312462 CGTCCGGGATCTCCTCGACGTTCTGAACGGAGCCGTTCTCGGCGATGATGCGGTTCTTCA 312521 Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62340 | | || | ||| | | |||||| | | | || || || | || || | | Sbjct 312522 TGTGGTCGTCCCACAGGCCGCACTCGGTGAGGTCCTTCAGCAGGTGGTGGTTGACGATCT 312581 Query 62341 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62400 | || || || || | || | ||| | ||| || || || || |||| || | ||||| Sbjct 312582 GGAACTCGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCTCGTGTACGCCTCGATCGACT 312641 Query 62401 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62460 |||| || || | || || || || || || |||||||| || || | || | || | Sbjct 312642 CATTGTTGCCGAGGATCTGTGCCGTCGACGCGGTCGGCATCGGCGCGAGCAGCAGGCTGT 312701 Query 62461 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 62520 | | | |||| | ||| || | || || | ||| | ||| || || | | Sbjct 312702 TGCGGACGCCGTGAGCGGCGATCTTCGCCTTGAGCGCGCTCCAGTCCCAGAGGTCGGTGG 312761 Query 62521 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 62580 | || || || | || || ||| || | || | || | Sbjct 312762 GGGTCACGCCCCACATGTCGTACTGCAGGACGCCCTTGCTGACGGGGCAGCCGGCGTACG 312821 Query 62581 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 62640 | ||||| || || |||||| || || || || |||||||| | || ||||| || | Sbjct 312822 TCTCGTAGGGGCCAAGCTTCTCCGCGAGCTCGCAGCTCGCCTCCAGCGCGCCGTAGTATA 312881 Query 62641 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 62700 | | ||||| |||| ||| || || || |||| | ||| || || || | | Sbjct 312882 TCGACTCGAATATCTGCTTGTTGAGCAGCTGGGCTTGCTCGCTCTCGAACGGCAAGCGCA 312941 Query 62701 AGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62760 ||| || |||||||| || | || ||||| || || ||||| || | || | | | | Sbjct 312942 TGAGGATGAACGCGTCGGCGAGACCCTGAACGCCGATGCCGATCGGACGGTGGCGCATGT 313001 Query 62761 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62820 | || || || || || || | || || || || || || ||||| || | Sbjct 313002 TCGATCGGCGCGCCTCCTCAACCGGGTAGAAGTTGATGTCGATGATCTTGTTGAGGTTGC 313061 Query 62821 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC----CATCTATT 62876 || || || ||| |||||||| ||| | || || | || | | | Sbjct 313062 GCGTGATGACCTTCGTCACGTCCTTCAGCTTGCGGAAGTCGTA-CGTCTTGTCCGCGCGC 313120 Query 62877 ACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62936 || ||||||| | || || || || || || || ||||| ||||| | || Sbjct 313121 ACGTACATGTTGAGCGCGACCGAGGCGAGGTTGCAGACGGCCGTCTCATCGGGCGACGAG 313180 Query 62937 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTA 62996 || | | || || ||||| || || || ||||| || || || | || || || || Sbjct 313181 TACTCGACGATTTCCGTGCACAGGTTGCTGCACTTAATGGTGCCGAGGTTCTGCTGGTTC 313240 Query 62997 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 63056 ||| || ||||| ||||| || || ||| | ||||| || ||||| |||| ||| Sbjct 313241 GACTTGCGATTGCACGCGTCCTTGTAGAGCATGTAGGGAGTTCCCGTTTCCGTCTGCGAT 313300 Query 63057 TCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATCT-CCTTTCTC 63114 || || || || | ||| | | || | || || || | | | | | || | || Sbjct 313301 TCCATGATGGCGTACCACAGCTGCT-GTGCTTTGATCGTCCTTCTCACTTTGCCCTGCT- 313358 Query 63115 TTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGG 63172 ||||||| | ||||| | | |||||| ||||| ||||| | | |||| || || Sbjct 313359 TTTCGTACTTGGTGTAGAGAGC--TTCGAATTCGTCGCCCCAGCAGTCGGCCAAGCCCGG 313416 Query 63173 ACATTCATCCGGACACATCAACGACCACTC-TCCGTCA-TCCTTCACTCGTTTCATAAAG 63230 ||||| |||||||||| | ||||| || | | | | | | ||||| ||| || Sbjct 313417 GCATTCCGCCGGACACATGAGAGACCAGTCCTGATTGAGTTCGACCCTCGT--CATGAAC 313474 Query 63231 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63290 ||||| || ||||| || | || || ||||| | || |||||||| || || || Sbjct 313475 AGATCCGGGATCCAGAGCCCGTAGAACAGGTCTCTCGCTCGCTGTTCCTCCTTCCCGGTG 313534 Query 63291 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63350 ||||| || ||||| ||| | | || || | |||||||| || | ||| || || Sbjct 313535 TTCTTCTTGCAGTCGAGAAACTCGAAGATGTCCGCGTGCCACGGCTCGAGGTACATCGCA 313594 Query 63351 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63410 | | || || || ||||| || ||||| || | ||| || || |||||||| | ||| Sbjct 313595 AAGGCGCCCGGACGCTTGTTGCCGCCCTGGTCGACGTACCTCGCCGTGTTATTGAAGACT 313654 Query 63411 CTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTG 63470 | || ||| |||| | ||||| || || ||||| |||| ||| |||||||| | Sbjct 313655 CGCAGCATGGGAAGGAGGCCGTTCGAGCAGCCGTTGGTGCCGGCGATGTAGCTTCCCGAG 313714 Query 63471 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 63530 || || || || || | || || || ||||| || || || | |||||| Sbjct 313715 GCGCGGATGTTGTGTATGTTGACGCCGATGCCTCCTGCGGACTTCGATATGAGCGCGCAT 313774 Query 63531 CGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAG 63590 || | |||||| ||||| ||||| ||||| || || |||| | || || || ||| Sbjct 313775 TCCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATCGTCAGCAGGAAGCAG 313834 Query 63591 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 63650 || || | || |||| || || || || || | || || || |||||||| ||| Sbjct 313835 CTGGAGAGCTGCGGACGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTGAAC 313894 Query 63651 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63710 || || || || || || ||||||||||| || || ||| || |||| || || || Sbjct 313895 CACTTCTCCGACAGCAGGTTGTACGTCTCGATGGCGCTGTCGATGTCCCTCTGGTGGATC 313954 Query 63711 CCTACTGCGACACGCATTAACATGTGCTGAGG 63742 || || | || | ||| | ||| ||||| || Sbjct 313955 CCGACGGACACCCTCATGAGCATCTGCTGGGG 313986 >seq99 Length=602874 Score = 163 bits (180), Expect = 4e-35 Identities = 160/204 (78%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 ||| |||||||||||| ||||| ||||| || || ||||||||||| || ||| ||| | Sbjct 458788 CCAGATTTTCATTCACAATTCCATCACTTGCAGCGAAAAACGCCAACACGTGTGATATGA 458847 Query 33746 AATATTTTTCGTCTGGTGTT-AGTTTATTCCAATCATTGATATCTTTAGATATATCTACT 33804 | | || || || ||| || ||||| | ||||||| | | |||||| | ||||| Sbjct 458848 AGTGTTGCTCCTC-GGTCTTCAGTTTGTCCCAATCAGTCAAATCTTTGCTGAGGTCTACC 458906 Query 33805 TCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATAT 33864 ||||||||||||||||| ||||||||||| || || ||||| | ||||||||||| ||| Sbjct 458907 TCTTCCACTGTCCAAAAGGATGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGATAC 458966 Query 33865 TGGATTGGGAAAATAACAAATCTA 33888 | ||| ||||||| ||||| ||| Sbjct 458967 TTGATGGGGAAAAGTACAAACCTA 458990 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| |||||||| || || || ||| || || || || ||||| | |||||| |||| Sbjct 457837 CCTCATCTCTACTGATGAGCTCATTGCTGAAGGTCAGACCAGGCATCAAGCCACGTTTTT 457896 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| ||||| | ||| ||||| || || ||||||||||| || || || | || | Sbjct 457897 TCAGCCAGAATATAGCAGCAAATGACCCTGAGAAGAAGATTCCCTCGACAGCCGAGAAAG 457956 Query 33446 CAATAAGTCTCTCTCCATA 33464 | | |||| ||| |||| Sbjct 457957 CCACCAGTCGCTCAGCATA 457975 Score = 82.4 bits (90), Expect = 1e-10 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 32998 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 33057 ||||| || ||||| || ||||| || || || | || || ||||| || || |||||| Sbjct 457045 GACATCACACCCATCTTCTGGTACTCGCCAACCCTCTTCTCAAAAAAGTTGGTCTTTCCT 457104 Query 33058 TCCAATGATATATTTTCCATGAAATCAAACGGATT 33092 ||||| ||||| | ||||||||||| |||||||| Sbjct 457105 TCCAAGGATATGTGCTCCATGAAATCGAACGGATT 457139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622483205564920