Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_007145.2 Length=37639 Score E Sequences producing significant alignments: (Bits) Value seq52478 104 6e-18 seq24545 80.6 6e-11 >seq52478 Length=231 Score = 104 bits (114), Expect = 6e-18 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 12093 ACGGGCACATCCTCGCCGGCCAGCATCACGGGCGCGCACAACAGGTATTCCGTCATGTCG 12152 || || |||||||| || || |||| ||| ||||| | | || ||||| |||| || Sbjct 17 ACCGGAACATCCTCACCAGCGAGCAACACAGGCGCACTGATCAAATATTCAGTCAGATCA 76 Query 12153 GTGCCGCGGCGCGTCACGGTGTACTGGTAGTTCTCCTGCAACAGCCCGACCGCCTTGTCG 12212 | || || | || | ||||||||||| ||||||||| || | | |||||||| ||| Sbjct 77 GCACCACGCCTTGTAATCGTGTACTGGTAACTCTCCTGCAGCAACGCCACCGCCTTATCG 136 Query 12213 ATTACGTCCTGTCGACGCGCGGACAGCTCTTCCCATCCGACCGGGTG 12259 || | | ||| | ||| ||||| | ||||||||| || |||||||| Sbjct 137 ATGATCTGCTGACCACGAGCGGATATCTCTTCCCAGCCAACCGGGTG 183 >seq24545 Length=459 Score = 80.6 bits (88), Expect = 6e-11 Identities = 140/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 12531 GGGAACGTCAGGTTGTGATACGGGCACTGCTT-GTCGGCTTCGGTGAAGTAGCAGTCTGG 12589 || |||||||| || ||||| ||||||||||| || || ||| ||||| || || || Sbjct 421 GGAAACGTCAGATTATGATAAGGGCACTGCTTAGTTGG-TTCAGTGAAATAACAATCATT 363 Query 12590 GCCTTCGTTGACGATCAGGCGGCCGTCGCGCCATGCAAGCCCGACGAAATTTGCGGCCTG 12649 || ||||| || | ||| ||| | ||| |||| |||||| || || | || | Sbjct 362 CCCCTCGTTAACCACCAGCTTGCCCTGTTTCCACGCAACCCCGACAAAGTTCACCGCATC 303 Query 12650 GCGCGCGCCGAGGTCGGCGCCGCGCTCGAGGATGTTGACCATGCGCTTGAACGGCGCCGG 12709 || ||||| |||| || || ||||| || || || |||| || || ||| || || Sbjct 302 ACGGGCGCCAAGGTGAGCTCCACGCTCTAGTATATTCACCAGTCGATTAAACTGCTGAGG 243 Query 12710 CGTCCAGATCGGGCCGAACTT 12730 | |||| |||||||| || Sbjct 242 CAAATAGATAGGGCCGAATTT 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120238059830094