Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq117 295 2e-74 seq459 143 7e-29 >seq117 Length=549210 Score = 295 bits (326), Expect = 2e-74 Identities = 522/761 (69%), Gaps = 0/761 (0%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||||||||| |||| || | | ||| || || || | ||| ||| | || Sbjct 313893 TTCACGCACGCGTCGCCGACGCTCTTCAACGCCGGCACGCCGCGTCCGCAGCTCTCCAGC 313834 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || || | ||||||||||| ||||||||| |||| ||||| || ||| | Sbjct 313833 TGCTTCCTGCTGACGATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAGGAA 313774 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726 || || || || || ||| ||||| || || || || || ||||| | || || Sbjct 313773 TGCGCGCTCATATCGAAGTCCGCAGGAGGCATCGGCGTCAACATACACAACATCCGCGCC 313714 Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 | || ||||| |||||| || | |||||| || || |||||||||| || Sbjct 313713 TCGGGAAGCTACATCGCCGGCACCAACGGCTGCTCGAACGGCCTCCTTCCCATGCTGCGA 313654 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 || || | || || |||||||||||||||||||| || ||||| || || ||| Sbjct 313653 GTCTTCAATAACACGGCGAGGTACGTCGACCAGGGCGGCAACAAGCGTCCGGGCGCCTTT 313594 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 || ||||| |||||||| || || || || || |||||||| || | ||| ||| Sbjct 313593 GCGATGTACCTCGAGCCGTGGCACGCGGACATCTTCGAGTTTCTCGACTGCAAGAAGAAC 313534 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966 || || || |||||| ||| || | || |||||||| | || ||| | | || | Sbjct 313533 ACCGGGAAGGAGGAACAGCGAGCGAGAGACCTGTTCTACGGGCTCTGGATCCCGGATCTG 313474 Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCA 364026 || |||| | | || || | || | ||||| ||| | || || ||||| || Sbjct 313473 TTCATGACGAGGGTCGAACTCAATCAGGACTGGTCTCTCATGTGTCCGGCGGAATGCCCG 313414 Query 364027 GGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAG 364086 || | |||| ||||| ||||| | | ||||| ||| ||||| ||| | || Sbjct 313413 GGCTTGGCCGACTGCTGGGGCGACGAATTCGAAGCTCTCTACACCAAGTACGAAAAGCAG 313354 Query 364087 GGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAG 364146 || || | | | ||| || |||||| |||| |||| ||||||||||| |||||| Sbjct 313353 GGCAAAGTGAGAAGGACGATCAAAGCACAGCAGCTGTGGTACGCCATCATGGAATCGCAG 313294 Query 364147 ATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAG 364206 | || || ||||| ||||| ||| | ||||| || ||||||| |||||||| |||||| Sbjct 313293 ACGGAAACGGGAACTCCCTACATGCTCTACAAGGACGCGTGCAATCGCAAGTCGAACCAG 313234 Query 364207 CAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCT 364266 ||| |||| || || ||| || |||||||| || || || || | || ||| | | Sbjct 313233 CAGAACCTCGGCACCATTAAGTGCAGCAACCTGTGCACGGAAATCGTCGAGTACTCGTCG 313174 Query 364267 CCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 ||||| ||||| ||||| || ||||| || ||| ||||||| Sbjct 313173 CCCGATGAGACGGCCGTCTGCAACCTCGCCTCGGTCGCGCT 313133 Score = 176 bits (194), Expect = 1e-38 Identities = 277/392 (71%), Gaps = 6/392 (2%) Strand=Plus/Minus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 ||||| ||||| || || || || |||||||||||||| ||||| |||| |||| || Sbjct 312687 GCGCCGATGCCGACCGCGTCGACGGCACAGATCCTCGGCAACAATGAGTCGATCGAGGCG 312628 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || ||||| | || || || || || || ||||| || || | | | || || | Sbjct 312627 TACACGAGCAACATCTACTCGCGGCGCGTGCTCTCCGGCGAGTTCCAGATCGTCAACCAC 312568 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 |||| | ||||| || |||| |||| ||||||| ||| |||||||||| ||| Sbjct 312567 CACCTGCTGAAGGACCTCACCGAGTGCGGCCTGTGGGACGACCACATGAAGAACCGCATC 312508 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAA-GATCTGAAGCCTAT 364988 ||||||| || || || || |||||| | | |||| ||| | | || ||||||| | Sbjct 312507 ATCGCCGAGAACGGCTCCGTTCAGAACGT-CGAGGAGATCCCGGACGACCTGAAGCAGCT 312449 Query 364989 TTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGG 365048 ||||| ||||| ||||| || || | || | || | ||||| ||||||||||| Sbjct 312448 CTACAAGACCGTCTGGGAGATCTCGCAGAAGACGATAATCAACATGGCTGCCGATCGCGG 312389 Query 365049 TGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCCGCC 365106 || || ||| ||||| ||||| | || |||||| | | |||| | | |||| Sbjct 312388 CGCCTTCATCGACCAGAGTCAGTCACTGAA--TATTCACCTCGCCGAGCCGAATTACGCC 312331 Query 365107 AAGCTTACATCCATGCATTTCTACGGGTGGAA 365138 |||||||| |||||| ||||||| |||||| Sbjct 312330 AAGCTTACCAGCATGCACTTCTACGCGTGGAA 312299 >seq459 Length=230215 Score = 143 bits (158), Expect = 7e-29 Identities = 395/595 (66%), Gaps = 14/595 (2%) Strand=Plus/Plus Query 111314 TTTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTG 111373 ||||||||| || || ||||||||| | | || | | ||| ||||| || || Sbjct 31484 TTTTCCACTGCTGACGACAAAGCGAGTCTTCTTCCGCGGCGTCGCCGAGGAACTACTCTG 31543 Query 111374 GTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGA 111433 ||| || ||||| || ||||| | ||| || || | | || || | || ||||| Sbjct 31544 GTTCATCCGCGGCAGCACAAACGGAAAAGAGCTGTCCGAGAAGGGCGTCCACATCTGGGA 31603 Query 111434 TGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGT-CTTGTCG-ACAACGAAGAAGGT 111491 || ||| | || || || || || || || || | || | | || || ||| Sbjct 31604 TGCCAATTGCTCGCGCGAGTTCCTTGA--CACCCGGAACCTGCAGCATCGCGTCGAGGGT 31661 Query 111492 GATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATG 111551 |||||||| || || || || ||||| ||||| ||||||||||| || ||||| ||| Sbjct 31662 GATCTCGGGCCGGTCTATGGCTTTCAGTGGCGTCACTTTGGTGCCGAGTACAAGGATATG 31721 Query 111552 CACGACTCATATGATTCA---CAGGGAACTGATCAATTACAGAATGTCATTGATCAAATT 111608 ||| | || | || ||||| ||| || | || |||||| | ||| Sbjct 31722 TACG---CGGATTACTCCGGCCAGGGCGTTGACCAGCTCGCCAAGGTCATTCACACGATT 31778 Query 111609 AAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGA 111667 |||| ||| ||| || | || | || |||||||| || ||||||||| || | Sbjct 31779 AAGACCAATCCCGACGAC-CGGAGAATCATTATGAGCGCGTGGAACCCACCTGATCTCCC 31837 Query 111668 AAAAATGGCACTTCCACCATGTCAT-CTTATGTGCCAGTTTTATGTACACGACGGGATGC 111726 ||| ||||| || || ||||| || | | ||| | | ||||| ||| | ||||| || Sbjct 31838 AAAGATGGCGCTGCCGCCATGCCACGCGTTTGTTCAA-TTTTACGTATGCAACGGGGAGC 31896 Query 111727 TTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTG 111786 | || ||||| | |||||||||||||| || || ||| | || || || || || || | Sbjct 31897 TGTCCTGCCAGCTTTATCAGCGATCTGCAGACATAGGTTTGGGCGTGCCTTTCAACATCG 31956 Query 111787 CAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAAT 111846 | || ||||| || || || | | | | || || | ||| || | |||||| || | Sbjct 31957 CCAGCTACGCGCTTCTAACGTACATGGTAGCGCACGTGACAGGCCTGAGACCGGGGGATT 32016 Query 111847 TCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGATGCACTTAA 111901 || | ||| || || || ||||| || ||| ||||||||| ||| | || || Sbjct 32017 TCGTGCACACGATGGGCGACGCGCACGTCTACGTAAACCACATAGATCCTCTCAA 32071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302358543697034