Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq490 140 2e-28 seq37 140 2e-28 seq355 120 2e-22 seq136 118 7e-22 seq1032 113 3e-20 seq1904 111 1e-19 seq1024 109 4e-19 seq1300 96.9 2e-15 seq1029 95.1 8e-15 seq3217 91.5 1e-13 seq24 82.4 5e-11 >seq490 Length=246587 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 24125 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 24066 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 24065 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 24031 >seq37 Length=978333 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 294973 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 294914 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 294913 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 294879 Score = 116 bits (128), Expect = 2e-21 Identities = 86/97 (89%), Gaps = 9/97 (9%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG------GGTAATCTCG 25955 ||||||||||||||||||||||||||| |||||||||||||||| || ||||||| Sbjct 285801 AAGCCCGTTCCCTTGGCTGTGGTTTCG-TAGATAGTAGATAGGGCACAGTGGGAATCTCG 285743 Query 25956 TTAATCCTTTC-ATGCGCGTCACTAATTAGATGACGA 25991 ||||||| ||| ||||||||||| ||||||||||||| Sbjct 285742 TTAATCCATTCAATGCGCGTCAC-AATTAGATGACGA 285707 Score = 107 bits (118), Expect = 1e-18 Identities = 73/81 (90%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| || Sbjct 289776 CTCTCTCTTCAA-GTTCTTTTCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCCCGT 289718 Query 20007 GGTAATATTTAGCCTTATTAT 20027 | | |||||||||||| ||| Sbjct 289717 GTCAGTATTTAGCCTTAGTAT 289697 >seq355 Length=281391 Score = 120 bits (132), Expect = 2e-22 Identities = 78/86 (91%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || ||||| || Sbjct 32927 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTTGT 32986 Query 25957 TAATCCTTTCATGCGCGTCACTAATT 25982 ||||||||||||||| |||||||||| Sbjct 32987 TAATCCTTTCATGCGTGTCACTAATT 33012 >seq136 Length=524869 Score = 118 bits (130), Expect = 7e-22 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 |||||||||| || || ||||| || ||||| |||||| | | || |||| |||||| Sbjct 467499 CCGACGAAATTCTTTGGCTGCGAGCTGGGCGCGCAGACGACGATGGACAACAAGAACGAG 467440 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 ||||||||||| ||||| |||| || | | | ||||||||| | || || ||||| Sbjct 467439 CGCTTCATCGTGAACGGCGCGCACGACGCCGTCCGCCTGCAGGACATGCTCGATGGCTTC 467380 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACC 6485 || |||||||||||||| || | | | ||||| || || || ||| Sbjct 467379 ATACGCAAGTTTGTGCTCTGCCCGCAGTGCGACAATCCCGAAACC 467335 >seq1032 Length=109488 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 8834 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCCCGT 8893 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 8894 GTCAGTATTTAGCCTTA 8910 >seq1904 Length=48599 Score = 111 bits (122), Expect = 1e-19 Identities = 76/86 (88%), Gaps = 5/86 (6%) Strand=Plus/Minus Query 25911 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTT 25965 |||||||||||||||||||| |||||||||||||| || |||||||||||||| || Sbjct 27686 CCCTTGGCTGTGGTTTCGCTGGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 27627 Query 25966 CATGCGCGTCACTAATTAGATGACGA 25991 ||||||| |||||||||| ||||||| Sbjct 27626 CATGCGCATCACTAATTACATGACGA 27601 >seq1024 Length=114862 Score = 109 bits (120), Expect = 4e-19 Identities = 80/93 (86%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 75942 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTACATAGGGACAGTGCGAATCTCGT 76001 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 | || | ||||||||||||||||||| ||||| Sbjct 76002 TGATGCATTCATGCGCGTCACTAATTCCATGAC 76034 Score = 96.9 bits (106), Expect = 2e-15 Identities = 77/93 (83%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA-----GGGGGTAATCTCGT 25956 |||||||||||||||||||||||| |||||||||||| ||| | | |||||||| Sbjct 89267 AAGCCCGTTCCCTTGGCTGTGGTTGCGCTAGATAGTACATATGCACAGTGCGAATCTCGT 89326 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 | || | ||||||||||||||||||| ||||| Sbjct 89327 TGATGCATTCATGCGCGTCACTAATTCCATGAC 89359 >seq1300 Length=83366 Score = 96.9 bits (106), Expect = 2e-15 Identities = 155/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||||| |||| |||||||| |||||| || || ||||| || |||| | || | Sbjct 8107 ACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCC 8048 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || | ||||||||||| || || ||||| |||||||| | ||||| || || || Sbjct 8047 ATCTTCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTT 7988 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGA--CAGT-ATCTCCACTTTCAACTTCTAATGT 38278 |||| ||||| |||||| || | | |||| | | | || |||||||| || Sbjct 7987 GTCCTGGATTTTGGCCTTCACGTTTTCAATGCAGTCAGATGC---CTCTACTTCTAAGGT 7931 Query 38279 AATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || |||| ||| || ||||| || |||||| Sbjct 7930 GATGGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCATG 7891 >seq1029 Length=113606 Score = 95.1 bits (104), Expect = 8e-15 Identities = 75/90 (83%), Gaps = 4/90 (4%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGGGTAATCTCGTTAATC 25961 |||| |||||||||||||| |||| |||||||||||||||||| || | ||||| Sbjct 71362 AAGCTCGTTCCCTTGGCTGCGGTTCCGCTAGATAGTAGATAGG----AACAGTGGTAATC 71307 Query 25962 CTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||||||||||||| |||||||||| || Sbjct 71306 CATTCATGCGCGTCACGAATTAGATGATGA 71277 >seq3217 Length=18976 Score = 91.5 bits (100), Expect = 1e-13 Identities = 73/88 (83%), Gaps = 9/88 (10%) Strand=Plus/Minus Query 25907 CGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT--------AGGGGGTAATCTCGTTA 25958 |||| |||||||||||||||||||||||| |||| || ||| ||| |||||| Sbjct 7814 CGTTTCCTTGGCTGTGGTTTCGCTAGATAAGAGATCCCTCTCTAGTGGG-AATATCGTTA 7756 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGAT 25986 |||| ||||||||||||||||||||||| Sbjct 7755 ATCCATTCATGCGCGTCACTAATTAGAT 7728 >seq24 Length=941673 Score = 82.4 bits (90), Expect = 5e-11 Identities = 82/105 (78%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 || |||||| ||||||||| ||||||||| ||||||||||| || | | ||| | || Sbjct 528637 CAGCACCAAGTGAAGAGTGGACTCCTTTTGGATATTGTAATCCGAAAGAGTGCGTCCATC 528696 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGAT-CGGAGG 38208 || | ||||| ||||||||||| || || || |||| |||||| Sbjct 528697 CTCCAGCTGTTTCCCGGCAAATATCAGCCGCTGCTGATCCGGAGG 528741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334703955795797