Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1300 105 6e-18 seq24 93.3 4e-14 >seq1300 Length=83366 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| |||| ||||| ||||||| | ||||| ||| | ||| Sbjct 7664 ATGCAGATCTTTGTAAAGACCCTGACTGGTAAGACCATCACCTTGGAAGTAGAGGCATCT 7723 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||| || || ||||| |||||| ||||| || || || || || || ||| Sbjct 7724 GACAGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCAA 7783 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||| || || | ||||||| |||||| || ||| ||||| Sbjct 7784 CAGCGCCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTGTCCGACTACAAC 7843 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || || || || Sbjct 7844 ATCCAGAAGGAGTCTACTCTTCA 7866 >seq24 Length=941673 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| ||||| || || || |||||| | || |||||||| ||||| | || |||| || Sbjct 528748 AGGAATTCCTCCGGATCAGCAGCGGCTGATATTTGCCGGGAAACAGCTGGAGGATGGACG 528689 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219 |||| | ||||||||||| ||||| || ||||| || || || ||||| ||||| || Sbjct 528688 CACTCTTTCGGATTACAATATCCAAAAGGAGTCCACTCTTCACTTGGTGCTGAGGCTCAG 528629 Query 25220 AGGAGG 25225 ||||| Sbjct 528628 GGGAGG 528623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433013310029405